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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c3c9zA_

Fold library idPDB HeaderMoleculeTitle
c3c9zA_PDB header: sugar binding protein, plant proteinChain: A: PDB Molecule: agglutinin ii;PDBTitle: sambucus nigra agglutinin ii (sna-ii), tetragonal crystal2 form


Added to library: Tue Mar 16 13:11:24 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence TSFTRNIVGRDGLCVDVRNGYDTDGTPLQLWPCGTQRNQRWTFDSDDTIRSMGKCMTANGLNNGSNIVIF
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Known secondary structure (DSSP)


GGG
GGG

STT
B




GGG

TTS
TTSSSTT
 .........80.........90.........100.........110.........120.........130.........140
Sequence NCSTAAENAIKWEVPIDGSIINPSSGLVMTAPRAASRTILLLEDNIYAASQGWTVTNNVKPIVASIVGYK
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Known secondary structure (DSSP)
TTTS
GGGS

B

TTS

B
TTT


SSSSTT
B





GGG

S

S

GG
 .........150.........160.........170.........180.........190.........200.........210
Sequence EMCLQSNGENNGVWMEDCEATSLQQQWALYGDRTIRVNSTRGLCVTTNGYNSKDLIIILKCQGLPSQRWF
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Known secondary structure (DSSP) G



TTSB



TT
GGG

TTS
TTSSSSTT
B



GGG

 .........220.........230.........240.........250.......
Sequence FNSDGAIVNPKSRLVMDVRASNVSLREIIIFPATGNPNQQWVTQVLP
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Known secondary structure (DSSP)
TTS

TTT

GGG
GGG






GGG




Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
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Michael Sternberg  
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