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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c3c8kA_

Fold library idPDB HeaderMoleculeTitle
c3c8kA_PDB header: immune systemChain: A: PDB Molecule: h-2 class i histocompatibility antigen, k-bPDBTitle: the crystal structure of ly49c bound to h-2kb


Added to library: Tue Mar 16 12:48:07 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence GPHSLRYFVTAVSRPGLGEPRYMEVGYVDDTEFVRFDSDAENPRYEPRARWMEQEGPEYWERETQKAKGN
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Known secondary structure (DSSP)



TTS
S
TTSSSSS
S

SGGGTTS
 .........80.........90.........100.........110.........120.........130.........140
Sequence EQSFRVDLRTLLGYYNQSKGGSHTIQVISGCEVGSDGRLLRGYQQYAYDGCDYIALNEDLKTWTAADMAA
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Known secondary structure (DSSP) T

TTS


TTS
TT
TTSS
SS
 .........150.........160.........170.........180.........190.........200.........210
Sequence LITKHKWEQAGEAERLRAYLEGTCVEWLRRYLKNGNATLLRTDSPKAHVTHHSRPEDKVTLRCWALGFYP
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Known secondary structure (DSSP) TTT
STTTS

B

TTTBS
 .........220.........230.........240.........250.........260.........270....
Sequence ADITLTWQLNGEELIQDMELVETRPAGDGTFQKWASVVVPLGKEQYYTCHVYHQGLPEPLTLRW
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Known secondary structure (DSSP) S
TT
SSS




SSS
TTGGGGTT
SS



Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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