PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c3c8cB_

Fold library id	PDB Header	Molecule	Title
c3c8cB_	PDB header: structural genomics, unknown function	Chain: B: PDB Molecule: methyl-accepting chemotaxis protein;	PDBTitle: crystal structure of mcp_n and cache domains of methyl-2 accepting chemotaxis protein from vibrio cholerae

Links to external resources
Added to library: Tue Mar 16 13:58:37 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence S L R S X V S D S V D E I V D G V S K T T A E V I N G R K S I A Q Y A T S L I E N N P E P D N V R T I I S Q P L I K N T F L L V G F G L E K

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S
S
T T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence D G S N I N N D P S W N P G P T W D P R V R P W Y K D A K N A G K L V I T A P Y A D S A S G E I L V S V A T P V K D S A T G Q F L G S I F Y

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T S
S
T T
T T
G G G S S S
T T T
T T T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence D V S L A E L A E L V N E V K L F D A G Y V F I V S E D G T T I A H P K K E F N G K P X S E F L G E S K I N V D T H Q V I I N G K P Y A V S

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T S
T T S
T T
B
S S G G G T T S B T S
S
S
T T

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 .

Sequence F S D V E G E D W Y V G V V I D E E I A Y A A L D E L R R S A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T S S

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	S	L	R	S	X	V	S	D	S	V	D	E	I	V	D	G	V	S	K	T	T	A	E	V	I	N	G	R	K	S	I	A	Q	Y	A	T	S	L	I	E	N	N	P	E	P	D	N	V	R	T	I	I	S	Q	P	L	I	K	N	T	F	L	L	V	G	F	G	L	E	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																																																					S	S								S							T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	D	G	S	N	I	N	N	D	P	S	W	N	P	G	P	T	W	D	P	R	V	R	P	W	Y	K	D	A	K	N	A	G	K	L	V	I	T	A	P	Y	A	D	S	A	S	G	E	I	L	V	S	V	A	T	P	V	K	D	S	A	T	G	Q	F	L	G	S	I	F	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	S					S		T	T					T	T			G	G	G	S										S	S										T	T	T														T	T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	D	V	S	L	A	E	L	A	E	L	V	N	E	V	K	L	F	D	A	G	Y	V	F	I	V	S	E	D	G	T	T	I	A	H	P	K	K	E	F	N	G	K	P	X	S	E	F	L	G	E	S	K	I	N	V	D	T	H	Q	V	I	I	N	G	K	P	Y	A	V	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)												T	T	S			T	T	S								T	T		B					S	S	G	G	G	T	T	S	B	T					S			S				S							T	T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
Sequence	F	S	D	V	E	G	E	D	W	Y	V	G	V	V	I	D	E	E	I	A	Y	A	A	L	D	E	L	R	R	S	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					T	T	S	S