PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c3c7jA_

Fold library id	PDB Header	Molecule	Title
c3c7jA_	PDB header: transcription regulator	Chain: A: PDB Molecule: transcriptional regulator, gntr family;	PDBTitle: crystal structure of transcriptional regulator (gntr family2 member) from pseudomonas syringae pv. tomato str. dc3000

Links to external resources
Added to library: Tue Mar 16 13:03:40 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence S N A X R K S D R E A F L S S V L G N E Q P P A H L A R T V I E E K L R N A I I D G S L P S G T A L R Q Q E L A T L F G V S R X P V R E A L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
G G G T S S S
T T
B
T S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence R Q L E A Q S L L R V E T H K G A V V A P L I T E D A V D A Y A L R I L L E S E A L R L S I P L L D A D D L A A A A S Y I E Q L E V E T D F

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T S T T T
G G G

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence G Q I G R L N R X F H L S L Y A K T H N K R L X R L V E E G L N E E E R F L R F N L S S X G L G K L S Q D D H W Q L L R L A E Q K A V E P C

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T T
S
T T

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . .

Sequence V E A L Q Y H L N R G V Q A V T Q Y L Q S Q K A G N V

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

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Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	S	N	A	X	R	K	S	D	R	E	A	F	L	S	S	V	L	G	N	E	Q	P	P	A	H	L	A	R	T	V	I	E	E	K	L	R	N	A	I	I	D	G	S	L	P	S	G	T	A	L	R	Q	Q	E	L	A	T	L	F	G	V	S	R	X	P	V	R	E	A	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																								G	G	G															T	S	S	S		T	T		B											T	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	R	Q	L	E	A	Q	S	L	L	R	V	E	T	H	K	G	A	V	V	A	P	L	I	T	E	D	A	V	D	A	Y	A	L	R	I	L	L	E	S	E	A	L	R	L	S	I	P	L	L	D	A	D	D	L	A	A	A	A	S	Y	I	E	Q	L	E	V	E	T	D	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						T	T	S					T	T	T																															G	G	G
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	G	Q	I	G	R	L	N	R	X	F	H	L	S	L	Y	A	K	T	H	N	K	R	L	X	R	L	V	E	E	G	L	N	E	E	E	R	F	L	R	F	N	L	S	S	X	G	L	G	K	L	S	Q	D	D	H	W	Q	L	L	R	L	A	E	Q	K	A	V	E	P	C
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)															T	T	T																																S															T	T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
Sequence	V	E	A	L	Q	Y	H	L	N	R	G	V	Q	A	V	T	Q	Y	L	Q	S	Q	K	A	G	N	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																									T