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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c3bz5A_

Fold library idPDB HeaderMoleculeTitle
c3bz5A_PDB header: cell adhesionChain: A: PDB Molecule: internalin-j;PDBTitle: functional domain of inlj from listeria monocytogenes2 includes a cysteine ladder


Added to library: Tue Mar 16 12:38:04 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence TLKAGQTQSFNDWFPDDNFASEVAAAFEMQATDTISEEQLATLTSLDCHNSSITDMTGIEKLTGLTKLIC
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Known secondary structure (DSSP)






SSTT

TTSTT



SS




TTGGG
TT
S
 .........80.........90.........100.........110.........120.........130.........140
Sequence TSNNITTLDLSQNTNLTYLACDSNKLTNLDVTPLTKLTYLNCDTNKLTKLDVSQNPLLTYLNCARNTLTE
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Known secondary structure (DSSP)
SS

S



TT
TT
S

SS

S



TT
TT



SS

S



TT
TT


TTS

S
 .........150.........160.........170.........180.........190.........200.........210
Sequence IDVSHNTQLTELDCHLNKKITKLDVTPQTQLTTLDCSFNKITELDVSQNKLLNRLNCDTNNITKLDLNQN
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Known secondary structure (DSSP)


TT
TT


TT
S






TT
TT



SS






TT
TT



SS

S



TT
 .........220.........230.........240.........250.........260.........270.........280
Sequence IQLTFLDCSSNKLTEIDVTPLTQLTYFDCSVNPLTELDVSTLSKLTTLHCIQTDLLEIDLTHNTQLIYFQ
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Known secondary structure (DSSP) TT
S

SS

S



TT
TT
S

SS

S



TT
TT


TT


S



TT
TT

 .........290.........300.........310.........320.........330.........340.........350
Sequence AEGCRKIKELDVTHNTQLYLLDCQAAGITELDLSQNPKLVYLYLNNTELTELDVSHNTKLKSLSCVNAHI
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Known secondary structure (DSSP)
TT
TT





TT
TT


TT


S



TT
TT


TT


S



TT
TT
S

SS

 .........360.........370.........380.........390.........400.........410.........420
Sequence QDFSSVGKIPALNNNFEAEGQTITMPKETLTNNSLTIAVSPDLLDQFGNPMNIEPGDGGVYDQATNTITW
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Known secondary structure (DSSP)
B
TTGGGSSGGGTS


B

BTTB

TT
B
TTS


SSSTTTT
 .........430.........440.........450
Sequence ENLSTDNPAVTYTFTSENGAIVGTVTTPFE
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Known secondary structure (DSSP) SS

TTS


TTSSB


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Michael Sternberg 
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