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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c3bxjB_

Fold library idPDB HeaderMoleculeTitle
c3bxjB_PDB header: signaling proteinChain: B: PDB Molecule: ras gtpase-activating protein syngap;PDBTitle: crystal structure of the c2-gap fragment of syngap


Added to library: Tue Mar 16 13:38:53 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence PNKDNSRRVDNVLGEHFEFNNHFTEQRLKARYQTMSILPMELYKEFAEYVTNHYRMLCAVLEPALNVKGK
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TTTS
TT
 .........80.........90.........100.........110.........120.........130.........140
Sequence EEVASALVHILQSTGKAKDFLSDMAMSEVDRFMEREHLIFRENTLATKAIEEYMRLIGQKYLKDAIGEFI
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Known secondary structure (DSSP) TT
TTT
TT
GGGGG
SSS
 .........150.........160.........170.........180.........190.........200.........210
Sequence RALYESEENCEVDPIKCTASSLAEHQANLRMCCELALCKVVNSHCVFPRELKEVFASWRLRCAERGREDI
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Known secondary structure (DSSP) S






GGG

TTTTSS
TTT
 .........220.........230.........240.........250.........260.........270.........280
Sequence ADRLISASLFLRFLCPAIMSPSLFGLMQEYPDEQTSRTLTLIAKVIQNLANFSKFTSKEDFLGFMNEFLE
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Known secondary structure (DSSP) TTTSSS
GGGTTS
SS


TT



SSSGGGGGG
 .........290.........300.........310.........320.........330.........340.........350
Sequence LEWGSMQQFLYEISNLDTLTNSSEGYIDLGRELSTLHALLWEVLPQLSKEALLKLGPLPRLLSDISTALR
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Known secondary structure (DSSP) TTTS
S
SS







GGGS
TTT
 ........
Sequence NPNIQRQP
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Known secondary structure (DSSP) STT





Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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