Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c3bwbA_

Fold library idPDB HeaderMoleculeTitle
c3bwbA_PDB header: transferaseChain: A: PDB Molecule: spermidine synthase;PDBTitle: crystal structure of the apo form of spermidine synthase2 from trypanosoma cruzi at 2.5 a resolution


Added to library: Tue Mar 16 11:58:41 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence SELISGGWFREENDQWPGQAXSLRVEKVLYDAPTKFQHLTIFESDPKGPWGTVXALDGCIQVTDYDEFVY
Predicted secondary structure


































SS confidence





































































Known secondary structure (DSSP)



TTS

TTSTT


SSS
TTSS

TTTTT
 .........80.........90.........100.........110.........120.........130.........140
Sequence HEVLGHTSLCSHPKPERVLIIGGGDGGVLREVLRHGTVEHCDLVDIDGEVXEQSKQHFPQISRSLADPRA
Predicted secondary structure

























SS confidence





































































Known secondary structure (DSSP) TTSS



TTSTT
TT

S

GGGG
TT
 .........150.........160.........170.........180.........190.........200.........210
Sequence TVRVGDGLAFVRQTPDNTYDVVIIDTTDPASKLFGEAFYKDVLRILKPDGICCNQGESIWLDLELIEKXS
Predicted secondary structure






























SS confidence





































































Known secondary structure (DSSP) S
TS
TT

S




SS

TTT
 .........220.........230.........240.........250.........260.........270.........280
Sequence RFIRETGFASVQYALXHVPTYPCGSIGTLVCSKKAGVDVTKPLRPVEDXPFAKDLKYYDSEXHKASFALP
Predicted secondary structure



























SS confidence





































































Known secondary structure (DSSP) T
S


TTSTTS

SSTT

TTS
SS
GGGSTTGGG
SS

TT


 ........
Sequence RFARHINN
Predicted secondary structure
SS confidence







Known secondary structure (DSSP) GGGGGGG


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg 
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D