PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c3buuB_

Fold library id	PDB Header	Molecule	Title
c3buuB_	PDB header: structural genomics, unknown function	Chain: B: PDB Molecule: uncharacterized lola superfamily protein ne2245;	PDBTitle: crystal structure of lola superfamily protein ne2245 from2 nitrosomonas europaea

Links to external resources
Added to library: Tue Mar 16 12:01:21 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence A V T A Q S I L E K A D E I R F P Q D S F Q V N V A I R T A A P D H A E D L Y R Y Q V L S K G N E N S I V X I T E P A S E R G Q A I L X K G

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S
S S
T T S
T T T S T T T T T
T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence R D L W V F X P S V S Q P I R L S L S Q R L T G Q V A N G D I A R A N F T G D Y H P Q L L R N E S I D D E D Y Y V L E L T G I D R S V T Y Q

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T
T T
S S
S S S T T
S B T T T T S S T T S S
S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence K V L L W V N Q S N F R P Y K A E F Y S V S G R L L K T S R Y E N F D N I L G E X R P T R I I X E D A L K S G E V S V L D Y S D X K L R D L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T T
T T S
T T S S S S

. . . . . . . . . 220

Sequence P D K I F T K D Y L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
G G G
S G G G

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	A	V	T	A	Q	S	I	L	E	K	A	D	E	I	R	F	P	Q	D	S	F	Q	V	N	V	A	I	R	T	A	A	P	D	H	A	E	D	L	Y	R	Y	Q	V	L	S	K	G	N	E	N	S	I	V	X	I	T	E	P	A	S	E	R	G	Q	A	I	L	X	K	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																S		S	S													T	T	S													T	T	T									S	T	T	T	T	T							T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	R	D	L	W	V	F	X	P	S	V	S	Q	P	I	R	L	S	L	S	Q	R	L	T	G	Q	V	A	N	G	D	I	A	R	A	N	F	T	G	D	Y	H	P	Q	L	L	R	N	E	S	I	D	D	E	D	Y	Y	V	L	E	L	T	G	I	D	R	S	V	T	Y	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T							T	T		S	S						S	S	S				T	T											S	B	T	T												T	T											S	S	T	T	S	S		S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	K	V	L	L	W	V	N	Q	S	N	F	R	P	Y	K	A	E	F	Y	S	V	S	G	R	L	L	K	T	S	R	Y	E	N	F	D	N	I	L	G	E	X	R	P	T	R	I	I	X	E	D	A	L	K	S	G	E	V	S	V	L	D	Y	S	D	X	K	L	R	D	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								T	T	T											T	T	S															T	T												S	S	S	S
	.	.	.	.	.	.	.	.	.	220
Sequence	P	D	K	I	F	T	K	D	Y	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		G	G	G		S	G	G	G