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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c3bs6B_

Fold library idPDB HeaderMoleculeTitle
c3bs6B_PDB header: membrane protein, protein transportChain: B: PDB Molecule: inner membrane protein oxaa;PDBTitle: 1.8 angstrom crystal structure of the periplasmic domain of2 the membrane insertase yidc


Added to library: Tue Mar 16 12:30:15 2010
 
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 1........10.........20.........30.........40.........50.........60.........70
Sequence GQGKLISVKTDVLDLTINTRGGDVEQALLPAYPKELNSTQPFQLLETSPQFIYQAQSGLTGRDGPDNPAN
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Known secondary structure (DSSP)




SS
TBTTSSTT

S
STTSTT
TTSGGG
 .........80.........90.........100.........110.........120.........130.........140
Sequence GPRPLYNVEKDAYVLAEGQNELQVPXTYTDAAGNTFTKTFVLKRGDYAVNVNYNVQNAGEKPLEISSFGQ
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Known secondary structure (DSSP) SS

B
B
S
S

TT
S
TT

TT



SSS
 .........150.........160.........170.........180.........190.........200.........210
Sequence LKQSITLFRGAAYSTPDEKYEKYKFDTIADNENLNISSKGGWVAXLQQYFATAWIPHNDGTNNFYTANLG
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Known secondary structure (DSSP) S




TTT


TT


S
TT
SS
 .........220.........230.........240.........250.........260
Sequence NGIAAIGYKSQPVLVQPGQTGAXNSTLWVGPEIQDKXAAVAPHLDLTVDH
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Known secondary structure (DSSP) TT



TT


STTGGGGS


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
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Michael Sternberg  
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