| 
      
        
  | ||||||
| Protein Homology/analogY Recognition Engine V 2.2 | |||||||
        
  | 
    
| Fold library id | PDB Header | Molecule | Title | 
|---|---|---|---|
| c3bnvD_ | PDB header: unknown function | Chain: D: PDB Molecule: cj0977; | PDBTitle: crystal structure of cj0977, a sigma28-regulated virulence2 protein from campylobacter jejuni. | 
| Added to library: Tue Mar 16 14:28:34 2010 | |
|   | |
| Links to external resources | |
|---|---|
|   | 1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | 
| Sequence | Q | L | E | E | Y | A | S | A | E | D | I | S | R | V | R | A | E | L | L | T | C | P | E | L | N | T | S | L | A | G | T | I | I | E | I | D | K | N | Y | A | K | S | I | L | I | T | T | S | E | X | V | A | D | D | Q | G | L | I | F | D | A | F | I | F | A | A | A | N | Y | V | 
| Predicted secondary structure | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | |||||||||||||||||||||||||
| SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Known secondary structure (DSSP) | G | G | G | T | S | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | S | T | T | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | T | T | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | G | G | G | B | S | S | T | T | B | B | T | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  |   | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | 
| Sequence | A | Q | A | S | I | N | K | E | F | S | V | I | I | G | S | K | C | F | F | Y | A | P | L | K | L | G | D | V | L | E | L | E | A | H | A | L | F | D | E | T | S | K | K | R | D | V | K | V | V | G | H | V | K | E | I | K | X | F | E | G | T | I | Q | V | V | S | T | D | E | H | 
| Predicted secondary structure | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ||||||||||||||||||
| SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Known secondary structure (DSSP) | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | S | S | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | S | B | T | T | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | S | S | S | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | T | T | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | S | S |   | . | . | . | ||||||||
| Sequence | I | F | K | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Predicted secondary structure | ![]()  | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Known secondary structure (DSSP) | T | T | 
| Download: | PDB structure | FASTA sequence | 
 Phyre is now FREE for commercial users! All images and data generated by Phyre2 are free to use in any publication with acknowledgement Accessibility Statement
  | ||||||||||||||||||||||