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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c3bitA_

Fold library idPDB HeaderMoleculeTitle
c3bitA_PDB header: transcriptionChain: A: PDB Molecule: fact complex subunit spt16;PDBTitle: crystal structure of yeast spt16 n-terminal domain


Added to library: Tue Mar 16 14:41:16 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence XEELNIDFDVFKKRIELLYSKYNEFEGSPNSLLFVLGSSNAENPYQKTTILHNWLLSYEFPATLIALVPG
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Known secondary structure (DSSP)






GGGSTT

S
S

TTSTT
SS

SSTT
 .........80.........90.........100.........110.........120.........130.........140
Sequence KVIIITSSAKAKHLQKAIDLFKDPESKITLELWQRNNKEPELNKKLFDDVIALINSAGKTVGIPEKDSYQ
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Known secondary structure (DSSP) TTTTSTT
S

TT

S
TT



 .........150.........160.........170.........180.........190.........200.........210
Sequence GKFXTEWNPVWEAAVKENEFNVIDISLGLSKVWEVKDVNEQAFLSVSSKGSDKFXDLLSNEXVRAVDEEL
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Known secondary structure (DSSP) ST

S
S

TT
 .........220.........230.........240.........250.........260.........270.........280
Sequence KITNAKLSDKIENKIDDVKFLKQLSPDLSALCPPNYKFNFDLLDWTYSPIIQSGKKFDLRVSARSTNDQL
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Known secondary structure (DSSP)

BGGG
TTS
TTS


GGGSS


SS



STT



SSB
 .........290.........300.........310.........320.........330.........340.........350
Sequence YGNGCILASCGIRYNNYCSNITRTFLIDPSEEXANNYDFLLTLQKEIVTNILKPGRTPKEVYESVIEYIE
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Known secondary structure (DSSP)

S
TT

S

T

TT

 .........360.........370.........380.........390.........400.........410.........420
Sequence KTKPELVPNFTKNIGSLIGLEFRDSNFILNVKNDYRKIQRGDCFNISFGFNNLKDSQSANNYALQLADTV
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Known secondary structure (DSSP)
GGGGGGB
S


SSSSS
TTSBSSTT

S



TT

TTT

 .........430.........440.......
Sequence QIPLDETEPPRFLTNYTKAKSQISFYF
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Known secondary structure (DSSP)

SSTTS

S

S





Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
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Michael Sternberg  
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