PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c3bfmA_

Fold library id	PDB Header	Molecule	Title
c3bfmA_	PDB header: structural genomics, unknown function	Chain: A: PDB Molecule: biotin protein ligase-like protein of unknown	PDBTitle: crystal structure of biotin protein ligase-like protein of2 unknown function (yp_612389.1) from silicibacter sp.3 tm1040 at 1.70 a resolution

Links to external resources
Added to library: Tue Mar 16 12:18:40 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence T I T F P P L X T G E A A G P G Q D P F D L A C Q K A E L G V D A G L V V Y E L G T D V L R A A L V L A P E V P L A K A X A X L P V C G V G

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T
T T
T T
T T
S S
S S
T T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence F Q N A L G A L A P P E V A V H L D W N G A L R I N G A R C G R L R I A A S T D D P D T Q P D W L V V G L D L P L W P E G D G G E T P D E T

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S
T T
T T S T T S
T T S
S
S S
S S
S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence A L Y A E G C A D V A A P R L L E S W A R H C L H W I N R W D E G E L E T I H G E W R G L A H G X G E A R T E A G R S G T F L G V D E D F G

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
G G G T T
T T
T T
B T T T T S T T
T T

. . . . . . . . . 220 . . . . . . . . . 230

Sequence X L L R D E T T T H L I P L T T V L V Q

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S
G G G G S

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

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Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	T	I	T	F	P	P	L	X	T	G	E	A	A	G	P	G	Q	D	P	F	D	L	A	C	Q	K	A	E	L	G	V	D	A	G	L	V	V	Y	E	L	G	T	D	V	L	R	A	A	L	V	L	A	P	E	V	P	L	A	K	A	X	A	X	L	P	V	C	G	V	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						T	T								T	T													T	T			T	T								S	S											S	S						T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	F	Q	N	A	L	G	A	L	A	P	P	E	V	A	V	H	L	D	W	N	G	A	L	R	I	N	G	A	R	C	G	R	L	R	I	A	A	S	T	D	D	P	D	T	Q	P	D	W	L	V	V	G	L	D	L	P	L	W	P	E	G	D	G	G	E	T	P	D	E	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									S		T	T							T	T	S					T	T											S				T	T	S			S										S	S				S	S						S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	A	L	Y	A	E	G	C	A	D	V	A	A	P	R	L	L	E	S	W	A	R	H	C	L	H	W	I	N	R	W	D	E	G	E	L	E	T	I	H	G	E	W	R	G	L	A	H	G	X	G	E	A	R	T	E	A	G	R	S	G	T	F	L	G	V	D	E	D	F	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		G	G	G	T	T		T	T																							T	T													B	T	T	T	T	S					T	T										T	T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230
Sequence	X	L	L	R	D	E	T	T	T	H	L	I	P	L	T	T	V	L	V	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						S	S							G	G	G	G	S