PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c3bf1C_

Fold library id	PDB Header	Molecule	Title
c3bf1C_	PDB header: transferase	Chain: C: PDB Molecule: type iii pantothenate kinase;	PDBTitle: type iii pantothenate kinase from thermotoga maritima2 complexed with pantothenate and adp

Links to external resources
Added to library: Tue Mar 16 13:53:53 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence M D P M Y L L V D V G N T H S V F S I T E D G K T F R R W R L S T G V F Q T E D E L F S H L H P L L G D A M R E I K G I G V A S V V P T Q N

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S S S S S S
T T
G G G G G T S
G G G

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence T V I E R F S Q K Y F H I S P I W V K A K N G C V K W N V K N P S E V G A D R V A N V V A F V K E Y G K N G I I I D M G T A T T V D L V V N

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S
S S S S
S S
G G G S
T
S
S S T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence G S Y E G G A I L P G F F M M V H S L F R G T A K L P L V E V K P A D F V V G K D T E E N I R L G V V N G S V Y A L E G I I G R I K E V Y G

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T
S S
S S S
S S

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 . . . . . . . .

Sequence D L P V V L T G G Q S K I V K D M I K H E I F D E D L T I K G V Y H F C F G

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S
S T T G G G T G G G S
S
T T

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	M	D	P	M	Y	L	L	V	D	V	G	N	T	H	S	V	F	S	I	T	E	D	G	K	T	F	R	R	W	R	L	S	T	G	V	F	Q	T	E	D	E	L	F	S	H	L	H	P	L	L	G	D	A	M	R	E	I	K	G	I	G	V	A	S	V	V	P	T	Q	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)												S	S								S	S	S	S	S										T	T															G	G	G	G	G	T									S		G	G	G
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	T	V	I	E	R	F	S	Q	K	Y	F	H	I	S	P	I	W	V	K	A	K	N	G	C	V	K	W	N	V	K	N	P	S	E	V	G	A	D	R	V	A	N	V	V	A	F	V	K	E	Y	G	K	N	G	I	I	I	D	M	G	T	A	T	T	V	D	L	V	V	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)												S										S	S	S	S				S	S		G	G	G	S															T		S								S	S									T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	G	S	Y	E	G	G	A	I	L	P	G	F	F	M	M	V	H	S	L	F	R	G	T	A	K	L	P	L	V	E	V	K	P	A	D	F	V	V	G	K	D	T	E	E	N	I	R	L	G	V	V	N	G	S	V	Y	A	L	E	G	I	I	G	R	I	K	E	V	Y	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T																							S	S											S	S	S		S	S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.
Sequence	D	L	P	V	V	L	T	G	G	Q	S	K	I	V	K	D	M	I	K	H	E	I	F	D	E	D	L	T	I	K	G	V	Y	H	F	C	F	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S							S	T	T	G	G	G	T	G	G	G	S			S				T	T