Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c3bewD_

Fold library idPDB HeaderMoleculeTitle
c3bewD_PDB header: immune systemChain: D: PDB Molecule: major histocompatibility complex class iPDBTitle: 10mer crystal structure of chicken mhc class i haplotype b21


Added to library: Tue Mar 16 14:05:05 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence ELHTLRYIRTAMTDPGPGLPWFVDVGYVDGELFMHYNSTARRAVPRTEWIAANTDQQYWDRETQIVQGSE
Predicted secondary structure























SS confidence





































































Known secondary structure (DSSP)

S


TT

STTTTT
S

ST

 .........80.........90.........100.........110.........120.........130.........140
Sequence QINRENLDILRRRYNQTGGSHTVQWMSGCDILEDGTIRGYHQAAYDGRDFVAFDKGTMTLTAAVPEAVPT
Predicted secondary structure























SS confidence





































































Known secondary structure (DSSP) TT

SS


TTS
TTTTTTSSGGG
 .........150.........160.........170.........180.........190.........200.........210
Sequence KRKWEEGGYAEGLKQYLEETCVEWLRRYVEYGKAELGRRERPEVRVWGKEADGILTLSCRAHGFYPRPIV
Predicted secondary structure























SS confidence





































































Known secondary structure (DSSP) TTTT

B

STTTTSBSS

 .........220.........230.........240.........250.........260.........270.
Sequence VSWLKDGAVRGQDAQSGGIVPNGDGTYHTWVTIDAQPGDGDKYQCRVEHASLPQPGLYSWR
Predicted secondary structure




























SS confidence




























































Known secondary structure (DSSP) TT

SS




TTS


TT
GGG
TT
SS



Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg 
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D