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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c3be1A_

Fold library idPDB HeaderMoleculeTitle
c3be1A_PDB header: transferaseChain: A: PDB Molecule: receptor tyrosine-protein kinase erbb-2;PDBTitle: dual specific bh1 fab in complex with the extracellular2 domain of her2/erbb-2


Added to library: Tue Mar 16 12:48:56 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence TQVCTGTDMKLRLPASPETHLDMLRHLYQGCQVVQGNLELTYLPTNASLSFLQDIQEVQGYVLIAHNQVR
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Known secondary structure (DSSP)


B

TT


S
TT
SSBS

TT


GGGGG

SS
S


S
 .........80.........90.........100.........110.........120.........130.........140
Sequence QVPLQRLRIVRGTQLFEDNYALAVLDNGDPSPGGLRELQLRSLTEILKGGVLIQRNPQLCYQDTILWKDI
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Known secondary structure (DSSP)



TT



SS
BTTT

S




S

B


TT


S


TT
BSGGG

 .........150.........160.........170.........180.........190.........200.........210
Sequence FHKNNQLALTLIDTNRSRACHPCSPMCKGSRCWGESSEDCQSLTRTVCAGGCARCKGPLPTDCCHEQCAA
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Known secondary structure (DSSP) B
GGGTT





SS





TT
TTS
BSSSSTT
B


SSTT
SSS
SS
SSSSTTT


TTBSS
 .........220.........230.........240.........250.........260.........270.........280
Sequence GCTGPKHSDCLACLHFNHSGICELHCPALVTYNTDTFESMPNPEGRYTFGASCVTACPYNYLSTDVGSCT
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Known secondary structure (DSSP)
BSSSSTTSBSSBSSTTSS


S
TTT


TT

TTSS

TT
TTSB
 .........290.........300.........310.........320.........330.........340.........350
Sequence LVCPLHNQEVTAEDGTQRCEKCSKPCARVCYGLGMEHLREVRAVTSANIQEFAGCKKIFGSLAFLPESFD
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Known secondary structure (DSSP) SS

SS
TTS

SSS




BTSGGGTT

S

GGGGGGGTT
SSB
GGGS
 .........360.........370.........380.........390.........400.........410.........420
Sequence GNTAPLQPEQLQVFETLEEITGYLYISAWPDSLPDLSVFQNLQVIRGRILHNGAYSLTLQGLGISWLGLR
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Known secondary structure (DSSP)






GGGGGGGGG

SS
S


TT

S
GGGTT



SS
BTTTS


S



T
 .........430.........440.........450.........460.........470.........480.........490
Sequence SLRELGSGLALIHHNTHLCFVHTVPWDQLFRNPHQALLHTANRPEDECVGEGLACHQLCARGHCWGPGPT
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Known secondary structure (DSSP) T


SS

TT


STTS
GGGTB
STT

SSS
TTT
S

TTBGGG
BSSSSSS
 .........500.........510.........520.........530.........540.........550.........560
Sequence QCVNCSQFLRGQECVEECRVLQGLPREYVNARHCLPCHPECQPQNGSVTCFGPEADQCVACAHYKDPPFC
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Known secondary structure (DSSP) SBSSBSSTTS

SSSS
SS
SSSB

TTB


TTS

BSSSSTT
BSSBSSTT
 .........570.........580...
Sequence VARCPSIWKFPDEEGACQPCPIN
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Known secondary structure (DSSP) SS





TTSB
S


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
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Michael Sternberg  
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