PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.0

Fold library entry viewer: c3bdrA_

Fold library id	PDB Header	Molecule	Title
c3bdrA_	PDB header: structural genomics, unknown function	Chain: A: PDB Molecule: ycf58 protein;	PDBTitle: crystal structure of fatty acid-binding protein-like ycf582 from thermosynecoccus elongatus. northeast structural3 genomics consortium target ter13.

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Added to library: Tue Mar 16 14:27:48 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence G X D I R D F F A Q S A G R W F S Q R T S H H L A F K Q T E S G K S Q L T I E L L S V D D P A V I A L C Q Q Y D X D P A W A V C G A R V S W

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T T T
T T S T T
T T T B

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence D G T H E G S T V L V P I X D Q G S R X E G K L L R E G R F S X G S D G A L T L I T E Y E T I Y S E E R L W F A S P N L R L R T S I L K R F

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T
S S
T T S
S S
T T T

. . . . . . . . . 150 . . . . . .

Sequence G G F S X A S F C S E I R L G V

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T

Download: PDB structure FASTA sequence
Hidden Markov model

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Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	G	X	D	I	R	D	F	F	A	Q	S	A	G	R	W	F	S	Q	R	T	S	H	H	L	A	F	K	Q	T	E	S	G	K	S	Q	L	T	I	E	L	L	S	V	D	D	P	A	V	I	A	L	C	Q	Q	Y	D	X	D	P	A	W	A	V	C	G	A	R	V	S	W
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																								T	T	T	T																T	T	S										T	T			T	T	T	B
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	D	G	T	H	E	G	S	T	V	L	V	P	I	X	D	Q	G	S	R	X	E	G	K	L	L	R	E	G	R	F	S	X	G	S	D	G	A	L	T	L	I	T	E	Y	E	T	I	Y	S	E	E	R	L	W	F	A	S	P	N	L	R	L	R	T	S	I	L	K	R	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																T	T		S	S														T	T	S									S	S												T	T											T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
Sequence	G	G	F	S	X	A	S	F	C	S	E	I	R	L	G	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T