PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c3bc5A_

Fold library id	PDB Header	Molecule	Title
c3bc5A_	PDB header: transcription	Chain: A: PDB Molecule: peroxisome proliferator-activated receptor gamma;	PDBTitle: x-ray crystal structure of human ppar gamma with 2-(5-(3-(2-2 (5-methyl-2-phenyloxazol-4-yl)ethoxy)benzyl)-2-phenyl-2h-1,3 2,3-triazol-4-yl)acetic acid

Links to external resources
Added to library: Tue Mar 16 13:23:45 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence M Q L N P E S A D L R A L A K H L Y D S Y I K S F P L T K A K A R A I L T G K T S P F V I Y D M N S L M M G E D K I K F K H K E V A I R I F

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S
S S
T
S S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence Q G C Q F R S V E A V Q E I T E Y A K S I P G F V N L D L N D Q V T L L K Y G V H E I I Y T M L A S L M N K D G V L I S E G Q G F M T R E F

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T S T T S T T S
T B
S S T T T T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence L K S L R K P F G D F M E P K F E F A V K F N A L E L D D S D L A I F I A V I I L S G D R P G L L N V K P I E D I Q D N L L Q A L E L Q L K

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T S T T T G G G T S T T
T
T T S T T
S

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 . . . . . . . . . 250 . . . . . . . . . 260 . . .

Sequence L N H P E S S Q L F A K L L Q K M T D L R Q I V T E H V Q L L Q V I K K T E M S L H P L L Q E I Y K D L Y

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T
S S T T T T

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

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Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	M	Q	L	N	P	E	S	A	D	L	R	A	L	A	K	H	L	Y	D	S	Y	I	K	S	F	P	L	T	K	A	K	A	R	A	I	L	T	G	K	T	S	P	F	V	I	Y	D	M	N	S	L	M	M	G	E	D	K	I	K	F	K	H	K	E	V	A	I	R	I	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				S																						S	S											T									S											S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	Q	G	C	Q	F	R	S	V	E	A	V	Q	E	I	T	E	Y	A	K	S	I	P	G	F	V	N	L	D	L	N	D	Q	V	T	L	L	K	Y	G	V	H	E	I	I	Y	T	M	L	A	S	L	M	N	K	D	G	V	L	I	S	E	G	Q	G	F	M	T	R	E	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																			T	T	S	T	T	S	T	T	S																								T	B		S	S					T	T	T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	L	K	S	L	R	K	P	F	G	D	F	M	E	P	K	F	E	F	A	V	K	F	N	A	L	E	L	D	D	S	D	L	A	I	F	I	A	V	I	I	L	S	G	D	R	P	G	L	L	N	V	K	P	I	E	D	I	Q	D	N	L	L	Q	A	L	E	L	Q	L	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	S	T	T	T	G	G	G	T	S												T	T																T		T	T	S	T	T		S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.
Sequence	L	N	H	P	E	S	S	Q	L	F	A	K	L	L	Q	K	M	T	D	L	R	Q	I	V	T	E	H	V	Q	L	L	Q	V	I	K	K	T	E	M	S	L	H	P	L	L	Q	E	I	Y	K	D	L	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				T	T		S	S																									T	T	T	T