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Protein Homology/analogY Recognition Engine V 2.2 |
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Fold library id | PDB Header | Molecule | Title |
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c3bboN_ | PDB header: ribosome | Chain: N: PDB Molecule: ribosomal protein l15; | PDBTitle: homology model for the spinach chloroplast 50s subunit2 fitted to 9.4a cryo-em map of the 70s chlororibosome |
Added to library: Tue Mar 16 12:07:08 2010 | |
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Links to external resources | |
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  | 1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 |
Sequence | F | R | L | D | N | L | G | P | Q | P | G | S | R | K | R | P | K | R | K | G | R | G | I | A | A | G | Q | G | A | S | C | G | F | G | M | R | G | Q | K | S | R | S | G | P | G | I | M | R | G | F | E | G | G | Q | M | P | L | Y | R | R | L | P | K | L | R | G | I | A | G | G |
Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | S | S | S | S | S | S | S | S | S | S | S | S | S | G | G | G | T | S | S | S | S | T | T | S | S | S | S | T | T | S | S | S |   | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 |
Sequence | M | H | A | G | L | P | K | Y | V | N | V | N | L | T | D | I | E | N | A | G | F | Q | D | G | E | E | V | S | L | E | T | L | K | A | K | R | V | I | N | P | S | G | R | E | R | K | L | P | L | K | I | L | A | D | G | E | L | S | K | K | L | T | I | K | A | G | A | F | S | T |
Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ||||||||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | S | S | S | S | S | S | S | S | S | S | S | S | T | T | T | T | T | T | T | S | S | S | S | S | S | S | S | S | S | S | S | S | S | S | S | T | G |   | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . |
Sequence | S | A | K | E | K | L | E | Y | A | G | C | S | L | I | V | L | P | G | R | K | K | W | V | K | P | S | V | A | K | N | L | A | R | A | E | E | ||||||||||||||||||||||||||||||||||
Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | G | G | T | T | S | S | T | T | T | T | ![]() | ![]() | S | S | S | S | S | S | S | S | S | ![]() | ![]() | S | S |
Download: | PDB structure | FASTA sequence |
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