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Protein Homology/analogY Recognition Engine V 2.2 |
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Fold library id | PDB Header | Molecule | Title |
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c3bboF_ | PDB header: ribosome | Chain: F: PDB Molecule: ribosomal protein l3; | PDBTitle: homology model for the spinach chloroplast 50s subunit2 fitted to 9.4a cryo-em map of the 70s chlororibosome |
Added to library: Tue Mar 16 14:10:24 2010 | |
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Links to external resources | |
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  | 1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 |
Sequence | R | D | R | K | L | T | K | P | E | M | G | H | L | E | K | S | G | I | I | P | L | R | H | L | Q | E | F | R | L | Q | S | I | D | G | F | E | V | T | Q | K | L | D | F | G | E | L | F | K | E | G | D | L | V | D | V | S | G | T | T | I | G | K | G | F | Q | G | G | I | K | R |
Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | |||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | S | S | ![]() | ![]() | ![]() | ![]() | T | T | S | S | S | S | S | T | T | T | T | S | S | S | S | S | S | S | S | B | S | S | S | S | S | S |   | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 |
Sequence | H | N | F | K | R | G | Q | M | T | H | G | S | K | S | H | R | Q | L | G | S | I | G | A | G | T | T | P | G | R | V | Y | K | G | K | K | M | P | G | R | M | G | G | T | K | R | K | I | R | K | L | K | I | V | K | I | D | D | Q | L | N | I | I | M | I | K | G | A | L | P | G |
Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | |||||||||||||||||||||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | S | S | S | S | S | S | T | T | T | S | S | S | S | T | T | T | T | T | T | S | B | ![]() | ![]() | ![]() | ![]() | ![]() | T | T | T | T | ![]() | ![]() | ![]() | ![]() | S | S | S |   | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | ||||||||||||||||||
Sequence | K | P | G | N | L | L | R | I | A | P | A | K | I | V | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | S | S | S |
Download: | PDB structure | FASTA sequence |
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