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Protein Homology/analogY Recognition Engine V 2.2 |
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Fold library id | PDB Header | Molecule | Title |
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c3bboE_ | PDB header: ribosome | Chain: E: PDB Molecule: ribosomal protein l2; | PDBTitle: homology model for the spinach chloroplast 50s subunit2 fitted to 9.4a cryo-em map of the 70s chlororibosome |
Added to library: Tue Mar 16 14:05:26 2010 | |
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Links to external resources | |
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  | 1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 |
Sequence | H | L | Y | K | T | S | T | S | S | T | R | N | G | A | V | Q | V | K | S | N | P | R | N | N | L | I | S | G | Q | R | R | C | G | K | G | R | N | A | R | G | I | I | T | A | R | H | R | G | G | G | H | K | R | L | Y | R | K | I | D | F | R | R | N | E | K | D | I | Y | G | K |
Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | |||||||||||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | S | S | S | S | S | S | S | S | S | S | S | S | S | S | S | S |   | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 |
Sequence | I | V | T | I | E | Y | D | P | N | R | N | A | Y | I | C | L | I | H | Y | G | D | G | E | K | R | Y | I | L | H | P | R | G | A | I | I | G | D | T | I | V | S | G | T | E | V | P | I | K | M | G | N | A | L | P | L | T | D | M | P | L | G | T | A | I | H | N | I | E | I | T |
Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ||||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | S | S | S | S | S | S | S | S | S | S | S | S | S | S | S | S | ![]() | ![]() | G | G | G | S | S | S | S | S | S |   | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 |
Sequence | L | G | R | G | G | Q | L | A | R | A | A | G | A | V | A | K | L | I | A | K | E | G | K | S | A | T | L | K | L | P | S | G | E | V | R | L | I | S | K | N | C | S | A | T | V | G | Q | V | G | N | V | G | V | N | Q | K | R | L | G | R | A | G | S | K | R | W | L | G | K | R |
Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ||||||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | S | S | S | S | T | T | T | B | S | S | S | T | T | B | S | T | T | B | S | S | ![]() | ![]() | S | S | ![]() | ![]() | ![]() | ![]() | S | S | S | S | S | S | S | T | T | T | S |   | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . |
Sequence | P | V | V | R | G | V | V | M | N | P | V | D | H | P | H | G | G | G | E | G | R | A | P | I | G | R | K | S | P | T | T | P | W | G | Y | P | A | L | G | R | R | S | R | K | R | N | K | Y | S | D | N | F | I | I | R | R | ||||||||||||||
Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ||||||||||||||||||||||||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | S | S | T | T | T | S | S | S | S | S | S | T | T | S | S | S | S | S | S | S | S | S | B |
Download: | PDB structure | FASTA sequence |
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