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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c3b9xA_

Fold library idPDB HeaderMoleculeTitle
c3b9xA_PDB header: hydrolaseChain: A: PDB Molecule: pyrimidine-specific ribonucleoside hydrolasePDBTitle: crystal structure of the e. coli pyrimidine nucleoside2 hydrolase yeik in complex with inosine


Added to library: Tue Mar 16 14:37:36 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence KRKIILDCDPGHDDAIAIMMAAKHPAIDLLGITIVAGNQTLDKTLINGLNVCQKLEINVPVYAGMPQPIM
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Known secondary structure (DSSP)




TT
SSSS
TT





SS
SS
 .........80.........90.........100.........110.........120.........130.........140
Sequence RQQIVADNIHGDTGLDGPVFEPLTRQAESTHAVKYIIDTLMASDGDITLVPVGPLSNIAVAMRMQPAILP
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Known secondary structure (DSSP) S




TTTSS
S










SS
S
S


S
S
GGGTT
 .........150.........160.........170.........180.........190.........200.........210
Sequence KIREIVLMGGAYGTGNFTPSAEFNIFADPEAARVVFTSGVPLVMMGLDLTNQTVCTPDVIARMERAGGPA
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Known secondary structure (DSSP) T




SS

SSSSS

T
TS
S

GGG

 .........220.........230.........240.........250.........260.........270.........280
Sequence GELFSDIMNFTLKTQFENYGLAGGPVHDATCIGYLINPDGIKTQEMYVEVDVNSGPCYGRTVCDELGVLG
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Known secondary structure (DSSP)

SS
TT
GGG


SSTTTT
TT
TT
 .........290.........300.........
Sequence KPANTKVGITIDTDWFWGLVEECVRGYIK
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Known secondary structure (DSSP)




TT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
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Michael Sternberg  
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