PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c3b90A_

Fold library id	PDB Header	Molecule	Title
c3b90A_	PDB header: lyase	Chain: A: PDB Molecule: endo-pectate lyase;	PDBTitle: crystal structure of the catalytic domain of pectate lyase2 peli from erwinia chrysanthemi

Links to external resources
Added to library: Tue Mar 16 13:38:41 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence S E C K P G A T F E N R T V D C G G V T I G T S C P N D S D K Q K P L I I L K N A T V K N L R I S A S G G A D G I H C D S G N C T I E N V I

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T S S
T T
S
G G G
S S
T T
T T
S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence W E D I C E D A A T N N G K T M T I V G G I A H N A K D G Y G G K P D K V L Q H N S K N S T T V V K G N F T L T G E H G K L W R S C G D C S

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S S
S S
S
S S S
T T S T T S S
S S S S
S S
T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence N N G G P R F L T V T S A T V N G T I D S I A G V N R N Y G D V A T I S G L K I K N Y K E G K P P V C E E F K G V V K G Q G S T E K Y G E K

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T
S S G G G T
S T T
B T T B S
T T S

. . . . . . . . . 220 . . . . . .

Sequence W D T T N C K V S R S G V S K L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S S S S S
T T S

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	S	E	C	K	P	G	A	T	F	E	N	R	T	V	D	C	G	G	V	T	I	G	T	S	C	P	N	D	S	D	K	Q	K	P	L	I	I	L	K	N	A	T	V	K	N	L	R	I	S	A	S	G	G	A	D	G	I	H	C	D	S	G	N	C	T	I	E	N	V	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					T	T					S	S					T	T									S		G	G	G				S					S										T	T			T	T							S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	W	E	D	I	C	E	D	A	A	T	N	N	G	K	T	M	T	I	V	G	G	I	A	H	N	A	K	D	G	Y	G	G	K	P	D	K	V	L	Q	H	N	S	K	N	S	T	T	V	V	K	G	N	F	T	L	T	G	E	H	G	K	L	W	R	S	C	G	D	C	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S	S		S	S		S					S	S						S							T	T	S	T	T	S	S									S	S	S							S																S	S		T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	N	N	G	G	P	R	F	L	T	V	T	S	A	T	V	N	G	T	I	D	S	I	A	G	V	N	R	N	Y	G	D	V	A	T	I	S	G	L	K	I	K	N	Y	K	E	G	K	P	P	V	C	E	E	F	K	G	V	V	K	G	Q	G	S	T	E	K	Y	G	E	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T										S	S															G	G	G	T							S				T	T		B	T	T	B	S											T	T	S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.
Sequence	W	D	T	T	N	C	K	V	S	R	S	G	V	S	K	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	S	S	S	S					T	T	S