PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c3b79A_

Fold library id	PDB Header	Molecule	Title
c3b79A_	PDB header: nucleotide binding protein	Chain: A: PDB Molecule: toxin secretion atp-binding protein;	PDBTitle: crystal structure of the n-terminal peptidase c39 like2 domain of the toxin secretion atp-binding protein from3 vibrio parahaemolyticus

Links to external resources
Added to library: Tue Mar 16 14:41:28 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence A X K D P L L N S L I Y V S R Y Y G L A N S P E A L V N G L P L S D G K L T P F L L P R A A E R A G L V A K E N R A E L E K I S S L I L P A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T
T T
B T T B
T T T T
G G G S
G G G
S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . .

Sequence I L V L K G G D S C V L N S I N X E T R E A E V T T L E S G X V P I S I P L E D L L E Q Y T G R Y F L V K K Q

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) G G G T T T T
T T T T T S

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

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Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	A	X	K	D	P	L	L	N	S	L	I	Y	V	S	R	Y	Y	G	L	A	N	S	P	E	A	L	V	N	G	L	P	L	S	D	G	K	L	T	P	F	L	L	P	R	A	A	E	R	A	G	L	V	A	K	E	N	R	A	E	L	E	K	I	S	S	L	I	L	P	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																	T	T										T	T				B	T	T	B			T	T	T									T										G	G	G	S		G	G	G		S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.
Sequence	I	L	V	L	K	G	G	D	S	C	V	L	N	S	I	N	X	E	T	R	E	A	E	V	T	T	L	E	S	G	X	V	P	I	S	I	P	L	E	D	L	L	E	Q	Y	T	G	R	Y	F	L	V	K	K	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					G	G	G										T	T	T	T							T	T	T	T	T	S