Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c3b4nB_

Fold library idPDB HeaderMoleculeTitle
c3b4nB_PDB header: lyaseChain: B: PDB Molecule: endo-pectate lyase;PDBTitle: crystal structure analysis of pectate lyase peli from2 erwinia chrysanthemi


Added to library: Tue Mar 16 12:39:12 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence AQTTLMLSQKSDVNYLGWSTDESKVARQEVYRGTTSNPDLRERIAVLDAETRTFKDADTNSGLNYWYWVD
Predicted secondary structure




























SS confidence





































































Known secondary structure (DSSP)

TT

SSSSS
GGG

SS




TT



 .........80.........90.........100.........110.........120.........130.........140
Sequence VVSENQAQVVSNAVTTAPSECKPGATFENRTVDCGGVTIGTSCPNDSDKQKPLIILKNATVKNLRISASG
Predicted secondary structure





































SS confidence





































































Known secondary structure (DSSP) TTS



S





TTSS
TT





SS





SS

TT
 .........150.........160.........170.........180.........190.........200.........210
Sequence GADGIHCDSGNCTIENVIWEDICEDAATNNGKTMTIVGGIAHNAKDGYGGKPDKVLQHNSKNSTTVVKGN
Predicted secondary structure



































SS confidence





































































Known secondary structure (DSSP)
TT
SSS
SS
S
SSS

TTSTTSS


SSSTT
 .........220.........230.........240.........250.........260.........270.........280
Sequence FTLTGEHGKLWRSCGDCSNNGGPRFLTVTSATVNGTIDSIAGVNRNYGDVATISGLKIKNYKEGKPPVCE
Predicted secondary structure


























SS confidence





































































Known secondary structure (DSSP)
SS
TT



SS
SGGGT

STT
BTTBS

 .........290.........300.........310....
Sequence EFKGVVKGQGSTEKYGEKWDTTNCKVSRSGVSKL
Predicted secondary structure






















SS confidence

































Known secondary structure (DSSP)


TTS



SS
SS
GGG


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg  
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D