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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c3b0vD_

Fold library idPDB HeaderMoleculeTitle
c3b0vD_PDB header: oxidoreductase/rnaChain: D: PDB Molecule: trna-dihydrouridine synthase;PDBTitle: trna-dihydrouridine synthase from thermus thermophilus in complex with2 trna


Added to library: Sat Dec 17 18:01:47 2011
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence XLDPRLSVAPXVDRTDRHFRFLVRQVSLGVRLYTEXTVDQAVLRGNRERLLAFRPEEHPIALQLAGSDPK
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Known secondary structure (DSSP)



S


TTT
S
SSSB


S



GGG
S
S
 .........80.........90.........100.........110.........120.........130.........140
Sequence SLAEAARIGEAFGYDEINLNLGCPSEKAQEGGYGACLLLDLARVREILKAXGEAVRVPVTVKXRLGLEGK
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Known secondary structure (DSSP) TT
S


ST
GGGGGG
TT
SS
S
BTT
 .........150.........160.........170.........180.........190.........200.........210
Sequence ETYRGLAQSVEAXAEAGVKVFVVHARSALLALSTKANREIPPLRHDWVHRLKGDFPQLTFVTNGGIRSLE
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Known secondary structure (DSSP)

TT


S
B
TTS
TTGGGTSS



TTSSS

S
 .........220.........230.........240.........250.........260.........270.........280
Sequence EALFHLKRVDGVXLGRAVYEDPFVLEEADRRVFGLPRRPSRLEVARRXRAYLEEEVLKGTPPWAVLRHXL
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Known secondary structure (DSSP) TTSSS
GGGGTTTS

S



TTT

TTTSG
 .........290.........300.........310.....
Sequence NLFRGRPKGRLWRRLLSEGRSLQALDRALRLXEEE
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Known secondary structure (DSSP) GGGTTSTT
S


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
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Michael Sternberg  
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