PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c3axjB_

Fold library id	PDB Header	Molecule	Title
c3axjB_	PDB header: dna binding protein	Chain: B: PDB Molecule: translin associated factor x, isoform b;	PDBTitle: high resolution crystal structure of c3po

Links to external resources
Added to library: Sat Apr 23 09:06:56 2011

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence Q L D E D S P I V Q Q F R I Y S N E L I X K H D R H E R I V K L S R D I T I E S K R I I F L L H S I D S R K Q N K E K V L E E A R Q R L N K

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T S T T
S
G G G

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence L I A V N F R A V A L E L R D Q D V Y Q F R S S Y S P G L Q E F I Q A Y T Y X E Y L C H E D A E G E N E T K S V S D W Q A I Q A V X Q Y V E

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T T T S
T T T T T
S S G G G G

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence E S S P K K F Q F F V D P T E Y I L G L S D L T G E L X R R C I N S L G S G D T D T C L D T C K A L Q H F Y S G Y I S L N C Q R A R E L W R

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T
T
T T

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240

Sequence K I T T X K Q S V L K A E N V C Y N V K V R G G E A A K W G

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	Q	L	D	E	D	S	P	I	V	Q	Q	F	R	I	Y	S	N	E	L	I	X	K	H	D	R	H	E	R	I	V	K	L	S	R	D	I	T	I	E	S	K	R	I	I	F	L	L	H	S	I	D	S	R	K	Q	N	K	E	K	V	L	E	E	A	R	Q	R	L	N	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				T	T	S																																										T	T			S		G	G	G
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	L	I	A	V	N	F	R	A	V	A	L	E	L	R	D	Q	D	V	Y	Q	F	R	S	S	Y	S	P	G	L	Q	E	F	I	Q	A	Y	T	Y	X	E	Y	L	C	H	E	D	A	E	G	E	N	E	T	K	S	V	S	D	W	Q	A	I	Q	A	V	X	Q	Y	V	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				T									T	T	T	S		T	T	T	T																									T		S	S	G	G	G	G
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	E	S	S	P	K	K	F	Q	F	F	V	D	P	T	E	Y	I	L	G	L	S	D	L	T	G	E	L	X	R	R	C	I	N	S	L	G	S	G	D	T	D	T	C	L	D	T	C	K	A	L	Q	H	F	Y	S	G	Y	I	S	L	N	C	Q	R	A	R	E	L	W	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																																					T	T																					T				T	T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
Sequence	K	I	T	T	X	K	Q	S	V	L	K	A	E	N	V	C	Y	N	V	K	V	R	G	G	E	A	A	K	W	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																													T