Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c3auyB_

Fold library idPDB HeaderMoleculeTitle
c3auyB_PDB header: recombinationChain: B: PDB Molecule: dna double-strand break repair rad50 atpase;PDBTitle: crystal structure of rad50 bound to adp


Added to library: Sat May 28 09:45:15 2011
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence MSMILKEIRMNNFKSHVNSRIKFEKGIVAIIGENGSGKSSIFEAVFFALFGAGSFNYDTIITKGKKSVYV
Predicted secondary structure






























SS confidence





































































Known secondary structure (DSSP)

TT

S
TTSS
S



GGGTB
TT
S
 .........80.........90.........100.........110.........120.........130.........140
Sequence ELDFEVNGNNYKIIREYDSGRGGAKLYKNGKPYATTISAVNKAVNEILGVDRNMFLNSIYIKQGEIAKFL
Predicted secondary structure



































SS confidence





































































Known secondary structure (DSSP) TTTTTT
S
S

TT
 .........150.........160.........170.........180.........190.........200.........210
Sequence SLKPSEKLETVAKLLGIDEFEKCYQKMGEIVKEYEKRLERIEGELNYNLEKEKEKLTKFVEYLDKVRRIF
Predicted secondary structure


SS confidence





































































Known secondary structure (DSSP) S
T

TTT
 .........220.........230.........240.........250.........260.........270.........280
Sequence GRNGFQAYLREKYVPLIQKYLNEAFSEFDLPYSFVELTKDFEVRVHAPNGVLTIDNLSGGEQIAVALSLR
Predicted secondary structure






SS confidence





































































Known secondary structure (DSSP) TTTTTTTT
S
STTTTTGGGS
 .........290.........300.........310.........320.........330.........340.........350
Sequence LAIANALIGNRVECIILDEPTVYLDENRRAKLAEIFRKVKSIPQMIIITHHRELEDVADVIINVKKDGNV
Predicted secondary structure














SS confidence





































































Known secondary structure (DSSP) SS

SSTTTT



SSSS
GGGGGG
SSSS
 .......
Sequence SKVKING
Predicted secondary structure


SS confidence






Known secondary structure (DSSP)


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg  
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D