PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c3aufA_

Fold library id	PDB Header	Molecule	Title
c3aufA_	PDB header: transferase	Chain: A: PDB Molecule: glycinamide ribonucleotide transformylase 1;	PDBTitle: crystal structure of glycinamide ribonucleotide transformylase 1 from2 symbiobacterium toebii

Links to external resources
Added to library: Sat Mar 10 11:55:29 2012

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence S S G E N L Y F Q G H M I R I G V L I S G S G T N L Q A I L D G C R E G R I P G R V A V V I S D R A D A Y G L E R A R R A G V D A L H M D P

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S B S S S
B T T
S S
T T S S S S S T T
T T
G

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence A A Y P S R T A F D A A L A E R L Q A Y G V D L V C L A G Y M R L V R G P M L T A F P N R I L N I H P S L L P A F P G L E A Q R Q A L E H G

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) G G S S S T T
S S S
S
S T T
S S
T T S S
S S
T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence V K V A G C T V H F V T A G V D E G P I I L Q A A V P V L E G D T V E D L R R R I L A E E H R I Y P E A I R L F A E G R L V I E G R R V R I

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S
S S T T
S
T T
T T
T T

. .

Sequence L D

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	S	S	G	E	N	L	Y	F	Q	G	H	M	I	R	I	G	V	L	I	S	G	S	G	T	N	L	Q	A	I	L	D	G	C	R	E	G	R	I	P	G	R	V	A	V	V	I	S	D	R	A	D	A	Y	G	L	E	R	A	R	R	A	G	V	D	A	L	H	M	D	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S	B	S	S	S		B	T	T									S	S														T	T	S	S	S									S	S	T	T										T	T								G
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	A	A	Y	P	S	R	T	A	F	D	A	A	L	A	E	R	L	Q	A	Y	G	V	D	L	V	C	L	A	G	Y	M	R	L	V	R	G	P	M	L	T	A	F	P	N	R	I	L	N	I	H	P	S	L	L	P	A	F	P	G	L	E	A	Q	R	Q	A	L	E	H	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	G	G	S	S	S															T	T		S					S	S			S										S	T	T							S	S		T	T	S	S		S	S										T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	V	K	V	A	G	C	T	V	H	F	V	T	A	G	V	D	E	G	P	I	I	L	Q	A	A	V	P	V	L	E	G	D	T	V	E	D	L	R	R	R	I	L	A	E	E	H	R	I	Y	P	E	A	I	R	L	F	A	E	G	R	L	V	I	E	G	R	R	V	R	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S											S	S	T	T		S												T	T																											T	T						T	T
	.	.
Sequence	L	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)