PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c3at7B_

Fold library id	PDB Header	Molecule	Title
c3at7B_	PDB header: structural protein	Chain: B: PDB Molecule: alginate-binding flagellin;	PDBTitle: crystal structure of bacterial cell-surface alginate-binding protein2 algp7

Links to external resources
Added to library: Sat Feb 26 08:41:44 2011

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence V A P L D L V Q P I S D Y K I Y V S E N L Q T L V R D T R E F T N A V K A G D V A K A K K L F A S T R M S Y E R I E P I A E L F S D L D A S

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
G G G G T T
T G G G G G G G

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence I D S R A D D H E K A E K D P A F F G F H R I E Y G L F A Q N S A K G L A P V A D K L M A D V L E L Q K R I R G L T F P P E K V V G G A A V

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
G G G S T T G G G
T T
S T S
T T
T T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence L M E E V A A T K I S G E E D R Y S H T D L W D F Q A N F E G A K K I V D L F R P L V V K D N R A F A D K V D A N F D T V F K T L A K Y R T

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T S T T S
T T T T T
T T B

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 . . . . . . . . . 250 .

Sequence A D G G F E L Y G K L S E R D R K V L A G R V N T L A E D L S K M R G L L G L D L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T S
B
G G G S
T T T T

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	V	A	P	L	D	L	V	Q	P	I	S	D	Y	K	I	Y	V	S	E	N	L	Q	T	L	V	R	D	T	R	E	F	T	N	A	V	K	A	G	D	V	A	K	A	K	K	L	F	A	S	T	R	M	S	Y	E	R	I	E	P	I	A	E	L	F	S	D	L	D	A	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			G	G	G	G																															T	T																			T	G	G	G	G	G	G	G
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	I	D	S	R	A	D	D	H	E	K	A	E	K	D	P	A	F	F	G	F	H	R	I	E	Y	G	L	F	A	Q	N	S	A	K	G	L	A	P	V	A	D	K	L	M	A	D	V	L	E	L	Q	K	R	I	R	G	L	T	F	P	P	E	K	V	V	G	G	A	A	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					G	G	G	S	T	T	G	G	G		T	T			S										T	S				T	T																				T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	L	M	E	E	V	A	A	T	K	I	S	G	E	E	D	R	Y	S	H	T	D	L	W	D	F	Q	A	N	F	E	G	A	K	K	I	V	D	L	F	R	P	L	V	V	K	D	N	R	A	F	A	D	K	V	D	A	N	F	D	T	V	F	K	T	L	A	K	Y	R	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								T	S	T	T	S		T	T	T	T	T																																																	T	T	B
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.
Sequence	A	D	G	G	F	E	L	Y	G	K	L	S	E	R	D	R	K	V	L	A	G	R	V	N	T	L	A	E	D	L	S	K	M	R	G	L	L	G	L	D	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T	S		B			G	G	G	S																										T	T	T	T