PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.0

Fold library entry viewer: c3anyB_

Fold library id	PDB Header	Molecule	Title
c3anyB_	PDB header: lyase	Chain: B: PDB Molecule: ethanolamine ammonia-lyase light chain;	PDBTitle: crystal structure of ethanolamine ammonia-lyase from escherichia coli2 complexed with cn-cbl and (r)-2-amino-1-propanol

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Added to library: Sat Aug 6 09:50:55 2011

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence A L D L G S A E A K A W I G V E N P H R A D V L T E L R R S T V A R V C T G R A G P R P R T Q A L L R F L A D H S R S K D T V L K E V P E E

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T S T
S S
S
S S
S
B T T B

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence W V K A Q G L L E V R S E I S D K N L Y L T R P D M G R R L C A E A V E A L K A Q C V A N P D V Q V V I S D G L S T D A I T V N Y E E I L P

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T T
B S
S T T
T S B
S
S S
S
T T
T T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence P L M A G L K Q A G L K V G T P F F V R Y G R V K I E D Q I G E I L G A K V V I L L V G E R P G L G Q S E S L S C Y A V Y S P R M A T T V E

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T T
B
T
T T T
S
S S
S
T T T
G

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 . . . . . . . . . 250 . .

Sequence A D R T C I S N I H Q G G T P P V E A A A V I V D L A K R M L E Q K A S G I N M T R

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) G G S S T T S B
T
G G G S

Download: PDB structure FASTA sequence
Hidden Markov model

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Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]

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Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	A	L	D	L	G	S	A	E	A	K	A	W	I	G	V	E	N	P	H	R	A	D	V	L	T	E	L	R	R	S	T	V	A	R	V	C	T	G	R	A	G	P	R	P	R	T	Q	A	L	L	R	F	L	A	D	H	S	R	S	K	D	T	V	L	K	E	V	P	E	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				T	T	S					T					S	S		S													S	S			S				B	T	T	B
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	W	V	K	A	Q	G	L	L	E	V	R	S	E	I	S	D	K	N	L	Y	L	T	R	P	D	M	G	R	R	L	C	A	E	A	V	E	A	L	K	A	Q	C	V	A	N	P	D	V	Q	V	V	I	S	D	G	L	S	T	D	A	I	T	V	N	Y	E	E	I	L	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				T	T	T						B	S			S					T	T						T	S	B												S		S	S		S								T	T							T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	P	L	M	A	G	L	K	Q	A	G	L	K	V	G	T	P	F	F	V	R	Y	G	R	V	K	I	E	D	Q	I	G	E	I	L	G	A	K	V	V	I	L	L	V	G	E	R	P	G	L	G	Q	S	E	S	L	S	C	Y	A	V	Y	S	P	R	M	A	T	T	V	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								T	T	T			B								T			T	T										T		S												S	S												S			T	T	T			G
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.
Sequence	A	D	R	T	C	I	S	N	I	H	Q	G	G	T	P	P	V	E	A	A	A	V	I	V	D	L	A	K	R	M	L	E	Q	K	A	S	G	I	N	M	T	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	G	G	S							S	T	T	S	B																				T			G	G	G	S