Fold library entry viewer: c3amkA_

Added to library: Sat Oct 1 10:26:04 2011
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	E	E	V	D	H	L	P	I	Y	D	L	D	P	K	L	E	E	F	K	D	H	F	N	Y	R	I	K	R	Y	L	D	Q	K	C	L	I	E	K	H	E	G	G	L	E	E	F	S	K	G	Y	L	K	F	G	I	N	T	V	D	G	A	T	I	Y	R	E	W	A	P	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		G	G	G	S								G	G	G	G	G	G																							S						T	T	G	G	G	T	S						T	T									T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	A	Q	E	A	Q	L	I	G	E	F	N	N	W	N	G	A	K	H	K	M	E	K	D	K	F	G	I	W	S	I	K	I	S	H	V	N	G	K	P	A	I	P	H	N	S	K	V	K	F	R	F	R	H	G	G	G	A	W	V	D	R	I	P	A	W	I	R	Y	A	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S							G	G	G	T	T			T	T	S	B					T	T	S									B	T	T	B		S	S		T	T										T	T		S							T	T		S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	F	D	A	S	K	F	G	A	P	Y	D	G	V	H	W	D	P	P	A	C	E	R	Y	V	F	K	H	P	R	P	P	K	P	D	A	P	R	I	Y	E	A	H	V	G	M	S	G	E	E	P	E	V	S	T	Y	R	E	F	A	D	N	V	L	P	R	I	R	A	N	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S	S	S	S	S												G	G	G	S					S							S	S								S	T	T		S	S	S	S	S											T							T	T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	Y	N	T	V	Q	L	M	A	I	M	E	H	S	Y	Y	A	S	F	G	Y	H	V	T	N	F	F	A	V	S	S	R	S	G	T	P	E	D	L	K	Y	L	V	D	K	A	H	S	L	G	L	R	V	L	M	D	V	V	H	S	H	A	S	N	N	V	T	D	G	L	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								S					S		G	G	G	T	T		S		S							G	G	G																T	T										S						T	T	T	S	G	G
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	G	Y	D	V	G	Q	N	T	H	E	S	Y	F	H	T	G	D	R	G	Y	H	K	L	W	D	S	R	L	F	N	Y	A	N	W	E	V	L	R	F	L	L	S	N	L	R	Y	W	M	D	E	F	M	F	D	G	F	R	F	D	G	V	T	S	M	L	Y	H	H	H	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	G	G		S	S			G	G	G	S	S	B			G	G	G	G			T	T	T	T				B		T	T	S																					S					T	T						B	T	T	T	T
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	I	N	K	G	F	T	G	N	Y	K	E	Y	F	S	L	D	T	D	V	D	A	I	V	Y	M	M	L	A	N	H	L	M	H	K	L	L	P	E	A	T	I	V	A	E	D	V	S	G	M	P	V	L	C	R	P	V	D	E	G	G	V	G	F	D	F	R	L	A	M	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T					S						S	S	T	T	B																				T	T								S	S			T	T	T	T	S		G	G	G	T	S				S					T	T
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	I	P	D	R	W	I	D	Y	L	K	N	K	E	D	R	K	W	S	M	S	E	I	V	Q	T	L	T	N	R	R	Y	T	E	K	C	I	A	Y	A	E	S	H	D	D	K	T	I	A	F	L	L	M	D	K	E	M	Y	T	G	M	S	D	L	Q	P	A	S	P	T	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)														G	G	G													S		T	T	S				B		S														G	G	G					T	B	T	T	S
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	N	R	G	I	A	L	Q	K	M	I	H	F	I	T	M	A	L	G	G	D	G	Y	L	N	F	M	G	N	E	F	G	H	P	E	W	I	D	F	P	R	E	G	N	N	W	S	Y	D	K	C	R	R	Q	W	S	L	V	D	T	D	H	L	R	Y	K	Y	M	N	A	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																				S	S					T	T	G	G	G	T			S							G	G	G	T	S			T	T	S	S									T	T	B	S
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	D	Q	A	M	N	A	L	E	E	E	F	S	F	L	S	S	S	K	Q	I	V	S	D	M	N	E	K	D	K	V	I	V	F	E	R	G	D	L	V	F	V	F	N	F	H	P	N	K	T	Y	K	G	Y	K	V	G	C	D	L	P	G	K	Y	R	V	A	L	D	S	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)													G	G	G											T	T	T	T							T	T									S	S											S	S		S								T	T
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.
Sequence	A	L	V	F	G	G	H	G	R	V	G	H	D	V	D	H	F	T	S	P	E	G	M	N	R	P	N	S	F	K	V	L	S	P	P	R	T	C	V	A	Y	Y	R	V	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	G	G	G	T					S		S	S													S									T	T

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PDB structure

FASTA sequence

Hidden Markov model

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