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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c3al9B_

Fold library idPDB HeaderMoleculeTitle
c3al9B_PDB header: signaling proteinChain: B: PDB Molecule: plexin-a2;PDBTitle: mouse plexin a2 extracellular domain


Added to library: Thu Oct 21 16:21:08 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence YSTFHSENRDWTFNHLTVHRRTGAVYVGAINRVYKLTGNLTIQVAHKTGPEEDNKACYPPLIVQPCSEVL
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Known secondary structure (DSSP)


SSSSS

TTT

TT
TT





TT
SS
TTTS


S

 .........80.........90.........100.........110.........120.........130.........140
Sequence TLTNNVNKLLIIDYSENRLLACGSLYQGVCKLLRLDDLFILVEPSHKKEHYLSSVNKTGTMYGVIVRSEG
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Known secondary structure (DSSP)




GGGT
S
TTT




SSGGG






SSS

TT
 .........150.........160.........170.........180.........190.........200.........210
Sequence EDGKLFIGTAVDGKQDYFPTLSSRKLPRDPESSAMLDYELHSDFVSSLIKIPSDTLALVSHFDIFYIYGF
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Known secondary structure (DSSP) S


TT
TTT

S
SSTT
TTTT
BSSB
SS
BS


STT


 .........220.........230.........240.........250.........260.........270.........280
Sequence ASGGFVYFLTVQPETPLFYTSRIVRLCKDDPKFHSYVSLPFGCTRAGVEYRLLQAAYLAKPGEALAQAFN
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Known secondary structure (DSSP) TT



BSS
TT
TT
TT


T
 .........290.........300.........310.........320.........330.........340.........350
Sequence ISSDEDVLFAIFSKGQKQYHHPPDDSALCAFPIRAINLQIKERLQSCYHGEGNLELNWLLGKDVQCTKAP
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Known secondary structure (DSSP)

TTS
BSB
SSS

S
TT
SB



S

B




 .........360.........370.........380.........390.........400.........410.........420
Sequence VPIDDNFCGLDINQPLGGSTPVEGLTLYTTSRDRLTSVASYVYNGYSVVFVGTKSGKLKKIRADGPPHGG
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Known secondary structure (DSSP)



TT



SSS
SB

SS
SSS
TTTTSTTT
 .........430.........440.........450.........460.........470.........480.........490
Sequence VQYEMVSVFKDGSPILRDMAFSINQLYLYVMSERQVTRVPVESCEQYTTCGECLSSGDPHCGWCALHNMC
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Known secondary structure (DSSP)

TT




S


TTSS
SSS

GGG

STS

TT
GGGT
 .........500.........510......
Sequence SRRDKCQRAWEANRFAASISQCMSSR
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Known secondary structure (DSSP)
GGGSTTTTSTTS
S


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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