Fold library entry viewer: c3ak5B_

Added to library: Tue Oct 19 12:47:24 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	G	T	V	N	N	E	L	G	Y	Q	L	F	R	D	F	A	E	N	K	G	M	F	R	P	G	A	T	N	I	A	I	Y	N	K	Q	G	E	F	V	G	T	L	D	K	A	A	M	P	D	F	S	A	V	D	S	E	I	G	V	A	T	L	I	N	P	Q	Y	I	A	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					T	T	B										T	T		G	G	G		T	T			S					B	T	T									S	S						T	T	B		T	T	T								T	T				B
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	V	K	H	N	G	G	Y	T	N	V	S	F	G	D	G	E	N	R	Y	N	I	V	D	R	N	N	A	P	S	L	D	F	H	A	P	R	L	D	K	L	V	T	E	V	A	P	T	A	V	T	A	Q	G	A	V	A	G	A	Y	L	D	K	E	R	Y	P	V	F	Y	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T			S							T	T	S											B		S	S	S	S		B					S	S				S	S					B		S	S		S		T	T	G	G	G		T	T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	L	G	S	G	T	Q	Y	I	K	D	S	N	G	Q	L	T	K	M	G	G	A	Y	S	W	L	T	G	G	T	V	G	S	L	S	S	Y	Q	N	G	E	M	I	S	T	S	S	G	L	V	F	D	Y	K	L	N	G	A	M	P	I	Y	G	E	A	G	D	S	G	S	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				S	S						T	T									T	T	S	S													G	G	G	T						T	T		T	T							S	S	B		B			T	T		T	T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	L	F	A	F	D	T	V	Q	N	K	W	V	L	V	G	V	L	T	A	G	N	G	A	G	G	R	G	N	N	W	A	V	I	P	L	D	F	I	G	Q	K	F	N	E	D	N	D	A	P	V	T	F	R	T	S	E	G	G	A	L	E	W	S	F	N	S	S	T	G	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						T	T	T	T												S	S	T	T		S																			T	B								S	T	T		S								T	T	T	T
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	G	A	L	T	Q	G	T	T	T	Y	A	M	H	G	Q	Q	G	N	D	L	N	A	G	K	N	L	I	F	Q	G	Q	N	G	Q	I	N	L	K	D	S	V	S	Q	G	A	G	S	L	T	F	R	D	N	Y	T	V	T	T	S	N	G	S	T	W	T	G	A	G	I	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						T	T									B	T	T	B	G	G	G			B					S	T	T						S	S					T	T						S	S							S	S						S	S
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	V	D	N	G	V	S	V	N	W	Q	V	N	G	V	K	G	D	N	L	H	K	I	G	E	G	T	L	T	V	Q	G	T	G	I	N	E	G	G	L	K	V	G	D	G	K	V	V	L	N	Q	Q	A	D	N	K	G	Q	V	Q	A	F	S	S	V	N	I	A	S	G	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	T											T	T							S	S	S							B					S						S	S							B			T	T					S		S						S	S
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	P	T	V	V	L	T	D	E	R	Q	V	N	P	D	T	V	S	W	G	Y	R	G	G	T	L	D	V	N	G	N	S	L	T	F	H	Q	L	K	A	A	D	Y	G	A	V	L	A	N	N	V	D	K	R	A	T	I	T	L	D	Y	G	Y	L	F	H	G	Q	L	K	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						S	S	T	T	S			G	G	G					T	T							T	T						S						S	T	T							S	S	S														S
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	N	L	N	V	D	N	R	L	P	E	G	V	T	G	A	L	V	M	D	G	A	A	D	I	S	G	T	F	T	Q	E	N	G	R	L	T	L	Q	G	H	P	V	I	H	A	Y	N	T	Q	S	V	A	D	K	L	A	A	S	G	D	H	S	V	L	T	Q	P	T	S	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S									S	S									S												S	S																									T	T						S	S	S			S
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	S	Q	E	D	W	E	N	R	S	F	T	F	D	R	L	S	L	K	N	T	D	F	G	L	G	R	N	A	T	L	N	T	T	I	Q	A	D	N	S	S	V	T	L	G	D	S	R	V	F	I	D	K	N	D	G	Q	G	T	A	F	T	L	E	E	G	T	S	V	A	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S		S																S							T	T											S								S						T	T	T	T	S	S	S
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700
Sequence	K	D	A	D	K	S	V	F	N	G	T	V	N	L	D	N	Q	S	V	L	N	I	N	D	I	F	N	G	G	I	Q	A	N	N	S	T	V	N	I	S	S	D	S	A	V	L	G	N	S	T	L	T	S	T	A	L	N	L	N	K	G	A	N	A	L	A	S	Q	S	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	G	G	G						S						S	S							S																		S						S												T	T							S
	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770
Sequence	V	S	D	G	P	V	N	I	S	D	A	T	L	S	L	N	S	R	P	D	E	V	S	H	T	L	L	P	V	Y	D	Y	A	G	S	W	N	L	K	G	D	D	A	R	L	N	V	G	P	Y	S	M	L	S	G	N	I	N	V	Q	D	K	G	T	V	T	L	G	G	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S	S						S						S	S		T	T				S		B														S	T	T							T	T											S	S
	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840
Sequence	G	E	L	S	P	D	L	T	L	Q	N	Q	M	L	Y	S	L	F	N	G	Y	R	N	I	W	S	G	S	L	N	A	P	D	A	T	V	S	M	T	D	T	Q	W	S	M	N	G	N	S	T	A	G	N	M	K	L	N	R	T	I	V	G	F	N	G	G	T	S	P	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			B		S												T	T	T	T		S					S													S							S											S							S		S	S	S
	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.	.	.	.	.	.	890	.	.	.	.	.	.	.	.	.	900	.	.	.	.	.	.	.	.	.	910
Sequence	T	T	L	T	T	D	N	L	D	A	V	Q	S	A	F	V	M	R	T	D	L	N	K	A	D	K	L	V	I	N	K	S	A	T	G	H	D	N	S	I	W	V	N	F	L	K	K	P	S	N	K	D	T	L	D	I	P	L	V	S	A	P	E	A	T	A	D	N	L	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)												S									S	S		B																					S	S				S	S	S											T	T	S		G	G	G
	.	.	.	.	.	.	.	.	.	920	.	.	.	.	.	.	.	.	.	930	.	.	.	.	.	.	.	.	.	940	.	.	.	.	.	.	.	.	.	950	.	.	.	.	.	.	.	.	.	960	.	.	.	.	.	.	.	.	.	970
Sequence	R	A	S	T	R	V	V	G	F	S	D	V	T	P	I	L	S	V	R	K	E	D	G	K	K	E	W	V	L	D	G	Y	Q	V	A	R	N	D	G	Q	G	K	A	A	A	T	F	M	H	I	S	Y	N	N	F	I	T	E	V	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				S	S		B	S	S	S												T	T																S	S		S		B	S	S	G	G	G

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PDB structure

FASTA sequence

Hidden Markov model

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