Fold library entry viewer: c3aicC_

Added to library: Sat Mar 26 08:49:41 2011
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	S	F	A	Q	Y	N	Q	V	Y	S	T	D	A	A	N	F	E	H	V	D	H	Y	L	T	A	E	S	W	Y	R	P	K	Y	I	L	K	D	G	K	T	W	T	Q	S	T	E	K	D	F	R	P	L	L	M	T	W	W	P	D	Q	E	T	Q	R	Q	Y	V	N	Y	M
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							S	B	S		S		G	G	G	B			B	T	T	B		B	T	T					B	S					T	T	T							T	T					G	G	G	T			S	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	N	A	Q	L	G	I	H	Q	T	Y	N	T	A	T	S	P	L	Q	L	N	L	A	A	Q	T	I	Q	T	K	I	E	E	K	I	T	A	E	K	N	T	N	W	L	R	Q	T	I	S	A	F	V	K	T	Q	S	A	W	N	S	D	S	E	K	P	F	D	D	H	L	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				T								T	T	S																							T	S															T	S	G	G	G	S	G	G	G	G		S			S	S	T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	K	G	A	L	L	Y	S	N	N	S	K	L	T	S	Q	A	N	S	N	Y	R	I	L	N	R	T	P	T	N	Q	T	G	K	K	D	P	R	Y	T	A	D	R	T	I	G	G	Y	E	F	L	L	A	N	D	V	D	N	S	N	P	V	V	Q	A	E	Q	L	N	W	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S							S	S		G	G	G	G	G	G			S								T	T	T	T	T	S	S			T	T			S			S		S			S			S	S					T	T	S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	H	F	L	M	N	F	G	N	I	Y	A	N	D	P	D	A	N	F	D	S	I	R	V	D	A	V	D	N	V	D	A	D	L	L	Q	I	A	G	D	Y	L	K	A	A	K	G	I	H	K	N	D	K	A	A	N	D	H	L	S	I	L	E	A	W	S	Y	N	D	T	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				T	T							S		G	G	G								T	T	G	G	G	S		T																T	T	T							T	T								S	T	T
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	Y	L	H	D	D	G	D	N	M	I	N	M	D	N	R	L	R	L	S	L	L	Y	S	L	A	K	P	L	N	Q	R	S	G	M	N	P	L	I	T	N	S	L	V	N	R	T	D	D	N	A	E	T	A	A	V	P	S	Y	S	F	I	R	A	H	D	S	E	V	Q	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					T	T		S	S	B		B												T	T	S		G	G	G				S	T					S	S	S	S			S					S	B		S	S						S			S	S	T	T	T
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	L	I	R	D	I	I	K	A	E	I	N	P	N	V	V	G	Y	S	F	T	M	E	E	I	K	K	A	F	E	I	Y	N	K	D	L	L	A	T	E	K	K	Y	T	H	Y	N	T	A	L	S	Y	A	L	L	L	T	N	K	S	S	V	P	R	V	Y	Y	G	D	M	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										T		T	T			T	T																					S	S		S	S	S		S										T	T		S	S	S										B
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	T	D	D	G	Q	Y	M	A	H	K	T	I	N	Y	E	A	I	E	T	L	L	K	A	R	I	K	Y	V	S	G	G	Q	A	M	R	N	Q	Q	V	G	N	S	E	I	I	T	S	V	R	Y	G	K	G	A	L	K	A	T	D	T	G	D	R	I	T	R	T	S	G	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S	S	B	S	T	T		S	B		T	T																	S										T	T											T	T			S	T	T									T
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	V	V	I	E	G	N	N	P	S	L	R	L	K	A	S	D	R	V	V	V	N	M	G	A	A	H	K	N	Q	A	Y	R	P	L	L	L	T	T	D	N	G	I	K	A	Y	H	S	D	Q	E	A	A	G	L	V	R	Y	T	N	D	R	G	E	L	I	F	T	A	A	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								T	T		B			T	T									G	G	G	T	T											S	S	S						S	T	G	G	G	G	G	G						T	T	S						T	T	T
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	I	K	G	Y	A	N	P	Q	V	S	G	Y	L	G	V	W	V	P	V	G	A	A	A	D	Q	D	V	R	V	A	A	S	T	A	P	S	T	D	G	K	S	V	H	Q	N	A	A	L	D	S	R	V	M	F	E	G	F	S	N	F	Q	A	F	A	T	K	K	E	E	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		B				S	S	S											S				T	T										S				S	S		S				B					T									T	T	B				S	S	G	G	G
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700
Sequence	T	N	V	V	I	A	K	N	V	D	K	F	A	E	W	G	V	T	D	F	E	M	A	P	Q	Y	V	S	S	T	D	G	S	F	L	D	S	V	I	Q	N	G	Y	A	F	T	D	R	Y	D	L	G	I	S	K	P	N	K	Y	G	T	A	D	D	L	V	K	A	I	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								T								T										S		B			S		S	S					T	T		S	S	S	B	S		T	T		S	S	S	S	S		B	T	T	B
	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770
Sequence	A	L	H	S	K	G	I	K	V	M	A	D	W	V	P	D	Q	M	Y	A	L	P	E	K	E	V	V	T	A	T	R	V	D	K	Y	G	T	P	V	A	G	S	Q	I	K	N	T	L	Y	V	V	D	G	K	S	S	G	K	D	Q	Q	A	K	Y	G	G	A	F	L	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					T	T										S						S												T	T			B		T	T		S														S	S	S						T	T	T	T
	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840
Sequence	E	L	Q	A	K	Y	P	E	L	F	A	R	K	Q	I	S	T	G	V	P	M	D	P	S	V	K	I	K	Q	W	S	A	K	Y	F	N	G	T	N	I	L	G	R	G	A	G	Y	V	L	K	D	Q	A	T	N	T	Y	F	S	L	V	S	D	N	T	F	L	P	K	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)															T	T	T	S	S				T	T	S			S	S			G	G	G								S			T	T		B				T	T	T	T				B			S	T	T		B
	.	.	.	.
Sequence	L	V	N	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)

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PDB structure

FASTA sequence

Hidden Markov model

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