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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c3afoB_

Fold library idPDB HeaderMoleculeTitle
c3afoB_PDB header: transferaseChain: B: PDB Molecule: nadh kinase pos5;PDBTitle: crystal structure of yeast nadh kinase complexed with nadh


Added to library: Sat Mar 19 08:48:25 2011
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence VKIKPVNNLRSSSSADFVSPPNSKLQSLIWQNPLQNVYITKKPWTPSTREAMVEFITHLHESYPEVNVIV
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Known secondary structure (DSSP)
GGGS






TT
SSSS



TT

TT

 .........80.........90.........100.........110.........120.........130.........140
Sequence QPDVAEEISQDFKSPLENDPNRPHILYTGPEQDIVNRTDLLVTLGGDGTILHGVSMFGNTQVPPVLAFAL
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Known secondary structure (DSSP)
GGG

S
GGG
TTS




SSTTTS




 .........150.........160.........170.........180.........190.........200.........210
Sequence GTLGFLSPFDFKEHKKVFQEVISSRAKCLHRTRLECHLKKKDSNSSIVTHAMNDIFLHRGNSPHLTNLDI
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Known secondary structure (DSSP) SS

SS

GGGTT




SSSSS
SS
TT
SS
 .........220.........230.........240.........250.........260.........270.........280
Sequence FIDGEFLTRTTADGVALATPTGSTAYSLSAGGSIVSPLVPAILMTPICPRSLSFRPLILPHSSHIRIKIG
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Known secondary structure (DSSP) TT
TGGGGTTT




TTS

S
S




TT


 .........290.........300.........310.........320.........330.........340.
Sequence SSVVKLSVDGIPQQDLDVGDEIYVINEVKRSGIYCVAKTENDWIRGINELLGFNSSFRLTK
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Known secondary structure (DSSP)


TT
TT





S
SSTTTT
TT







Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
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Michael Sternberg  
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