PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c3a1zC_

Fold library id	PDB Header	Molecule	Title
c3a1zC_	PDB header: transport protein	Chain: C: PDB Molecule: hemolymph juvenile hormone binding protein;	PDBTitle: crystal structure of juvenile hormone binding protein from silkworm

Links to external resources
Added to library: Sat Aug 28 16:06:16 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence L L K P C K L G D M Q C L S S A T E Q F L E K T S K G I P Q Y D I W P I D P L V V T S L D V I A P S D A G I V I R F K N L N I T G L K N Q Q

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
B
T T
T T T
B G G G T B
T T T T
G G G

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence I S D F Q M D T K A K T V L L K T K A D L H I V G D I V I E L T E Q S K S F T G L Y T A D T N V I G A V R Y G Y N L K N D D N G V Q H F E V

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T T T G G G T
T T S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence Q P E T F T C E S I G E P K I T L S S D L S S A L E K D S G N E P L K T L R Q A A I C K I A E A C Y I S V V H N I R A S A K I L P A S S F F

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T
S
S G G G B

. .

Sequence E N

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	L	L	K	P	C	K	L	G	D	M	Q	C	L	S	S	A	T	E	Q	F	L	E	K	T	S	K	G	I	P	Q	Y	D	I	W	P	I	D	P	L	V	V	T	S	L	D	V	I	A	P	S	D	A	G	I	V	I	R	F	K	N	L	N	I	T	G	L	K	N	Q	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					B		T	T																T	T	T		B	G	G	G	T	B				T	T											T	T																G	G	G
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	I	S	D	F	Q	M	D	T	K	A	K	T	V	L	L	K	T	K	A	D	L	H	I	V	G	D	I	V	I	E	L	T	E	Q	S	K	S	F	T	G	L	Y	T	A	D	T	N	V	I	G	A	V	R	Y	G	Y	N	L	K	N	D	D	N	G	V	Q	H	F	E	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								T	T	T	T																					G	G	G	T																											T	T	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	Q	P	E	T	F	T	C	E	S	I	G	E	P	K	I	T	L	S	S	D	L	S	S	A	L	E	K	D	S	G	N	E	P	L	K	T	L	R	Q	A	A	I	C	K	I	A	E	A	C	Y	I	S	V	V	H	N	I	R	A	S	A	K	I	L	P	A	S	S	F	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																														T																																		S		S	G	G	G	B
	.	.
Sequence	E	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)