Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c3a1iA_

Fold library idPDB HeaderMoleculeTitle
c3a1iA_PDB header: hydrolaseChain: A: PDB Molecule: amidase;PDBTitle: crystal structure of rhodococcus sp. n-771 amidase complexed2 with benzamide


Added to library: Sat Aug 28 18:40:46 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence ATIRPDDKAIDAAARHYGITLDKTARLEWPALIDGALGSYDVVDQLYADEATPPTTSREHAVPSASENPL
Predicted secondary structure
























SS confidence





































































Known secondary structure (DSSP)





TT



TTS








B


GGG
TT
 .........80.........90.........100.........110.........120.........130.........140
Sequence SAWYVTTSIPPTSDGVLTGRRVAIKDNVTVAGVPMMNGSRTVEGFTPSRDATVVTRLLAAGATVAGKAVC
Predicted secondary structure



































SS confidence





































































Known secondary structure (DSSP) S


SS

TTTT
TTB

TTS
B
TT
TTTTTB

SS

TTT


 .........150.........160.........170.........180.........190.........200.........210
Sequence EDLCFSGSSFTPASGPVRNPWDRQREAGGSSGGSAALVANGDVDFAIGGDQGGAIRIPAAFCGVVGHKPT
Predicted secondary structure












































SS confidence





































































Known secondary structure (DSSP) SGGG

SSSS

TT


TT

SSSTS
SSSSTTT

S
 .........220.........230.........240.........250.........260.........270.........280
Sequence FGLVPYTGAFPIERTIDHLGPITRTVHDAALMLSVIAGRDGNDPRQADSVEAGDYLSTLDSDVDGLRIGI
Predicted secondary structure


















































SS confidence





































































Known secondary structure (DSSP) TTTS

TTB

S
GGG
SS
S

SS
TTS
TT




SSTTTTS

TT
 .........290.........300.........310.........320.........330.........340.........350
Sequence VREGFGHAVSQPEVDDAVRAAAHSLTEIGCTVEEVNIPWHLHAFHIWNVIATDGGAYQMLDGNGYGMNAE
Predicted secondary structure






















SS confidence





































































Known secondary structure (DSSP) GGGS

SSS
GGGGGT


TTTTTTTT
SS

 .........360.........370.........380.........390.........400.........410.........420
Sequence GLYDPELMAHFASRRIQHADALSETVKLVALTGHHGITTLGGASYGKARNLVPLARAAYDTALRQFDVLV
Predicted secondary structure













SS confidence





































































Known secondary structure (DSSP) S


SGGGS
TTTTT
S
 .........430.........440.........450.........460.........470.........480.........490
Sequence MPTLPYVASELPAKDVDRATFITKALGMIANTAPFDVTGHPSLSVPAGLVNGLPVGMMITGRHFDDATVL
Predicted secondary structure





























SS confidence





































































Known secondary structure (DSSP) SSSS


B


TT

TT
TTT


TTSTT
 .........500........
Sequence RVGRAFEKLRGAFPTPAE
Predicted secondary structure








SS confidence

















Known secondary structure (DSSP)




TT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg  
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D