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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c2zykA_

Fold library idPDB HeaderMoleculeTitle
c2zykA_PDB header: sugar binding proteinChain: A: PDB Molecule: solute-binding protein;PDBTitle: crystal structure of cyclo/maltodextrin-binding protein2 complexed with gamma-cyclodextrin


Added to library: Tue Mar 16 14:40:13 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence KPDKLVVWENADDGVQLNNTKKWAGEFTKKTGIQVEVVPVALLKQQEKLTLDGPAGKGADLVTWPHDRLG
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Known secondary structure (DSSP)





SS



TTTGGGT
S
SGGGTT
 .........80.........90.........100.........110.........120.........130.........140
Sequence EAVTKGLLQPIQVDNSVKNQFDDVAMKALTYGGKLYGLPKAIESVALIYNKKLMGQVPATYDELFQYAKA
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Known secondary structure (DSSP) TT





TB
TTT


TTT
SS

SB
 .........150.........160.........170.........180.........190.........200.........210
Sequence NNKPDEQKYGVLFEANNFYYTYFLFAAKGAAVFKEQDGTLDPNEIGLNSPEAVQGMNEVQKWFTEARLPQ
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Known secondary structure (DSSP)
BTTTTB
TT
TTTT

S
SSSS

TTSTS


T
 .........220.........230.........240.........250.........260.........270.........280
Sequence SLKADTVNGLFKSGKVAAVINGPWAIKDYQAAGINVGVAPLPKIDGKDAQTFIGVKGWYLSAYSKYPKYA
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Known secondary structure (DSSP) T

TT

GGGTT




BSSSS



TT
S
 .........290.........300.........310.........320.........330.........340.........350
Sequence TELMQFLTSKEALASRFKETGEIPPQKELLNDPMIKNNPVVNGFAKQASKGVPMPSIPEMGVVWEPINNA
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Known secondary structure (DSSP) S




B
S
TT



SGGG
 .........360.........370.........380.
Sequence HTFVAQGKQTPEQALNDAVKIMKEKIQTMKQ
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Known secondary structure (DSSP) TTSS



Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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