Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c2zmvB_

Fold library idPDB HeaderMoleculeTitle
c2zmvB_PDB header: transport proteinChain: B: PDB Molecule: trafficking protein particle complex subunit 4;PDBTitle: crystal structure of synbindin


Added to library: Tue Mar 16 12:19:44 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence AIFSVYVVNKAGGLIYQLDSYAPRAEAEKTFSYPLDLLLKLHDERVLVAFGQRDGIRVGHAVLAINGMDV
Predicted secondary structure









































SS confidence





































































Known secondary structure (DSSP)

TTS








SS
SSTT


TT

TT
TT
 .........80.........90.........100.........110.........120.........130.........140
Sequence NGRYTADGKEVLEYLGNPANYPVSIRFGRPRLTSNEKLMLASMFHSLFAIGSSSGIEMLETDTFKLHCYQ
Predicted secondary structure
























































SS confidence





































































Known secondary structure (DSSP) BTTB
TTS
BSS
STT





TTSS
SS
TT




SS
 .........150.........160.........170.........180.........190.........200...
Sequence TLTGIKFVVLADPRQAGIDSLLRKIYEIYSDFALKNPFYSLEMPIRCELFDQNLKLALEVAEK
Predicted secondary structure


















SS confidence






























































Known secondary structure (DSSP)
TTS

TT



TT

TTS





Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg  
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D