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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c2zleB_

Fold library idPDB HeaderMoleculeTitle
c2zleB_PDB header: hydrolaseChain: B: PDB Molecule: protease do;PDBTitle: cryo-em structure of degp12/omp


Added to library: Wed Jan 9 15:17:13 2013
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence QMPSLAPMLEKVMPSVVSINVEGSTTVNTPRMPRNFQQFFGGQQQKFMALGSGVIIDADKGYVVTNNHVV
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Known secondary structure (DSSP)



SGGG



SS

TT




TTTT
 .........80.........90.........100.........110.........120.........130.........140
Sequence DNATVIKVQLSDGRKFDAKMVGKDPRSDIALIQIQNPKNLTAIKMADSDALRVGDYTVAIGNPFGLGETV
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Known secondary structure (DSSP) TT
TTS
TTTTS

S




B

GGG

TT

TTSS

 .........150.........160.........170.........180.........190.........200.........210
Sequence TSGIVSALGRENFIQTDAAINRGNSGGALVNLNGELIGINTAILAPDGGNIGIGFAIPSNMVKNLTSQMV
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Known secondary structure (DSSP)




S


TT





TTS

SSTTT


SSS
 .........220.........230.........240.........250.........260.........270.........280
Sequence EYGQVKRGELGIMGTELNSELAKAMKVDAQRGAFVSQVLPNSSAAKAGIKAGDVITSLNGKPISSFAALR
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Known secondary structure (DSSP) SS





SSSTTT
SS
SS
TTS


TT

TT

S
 .........290.........300.........310.........320.........330.........340.........350
Sequence AQVGTMPVGSKLTLGLLRDGKQVNVNLELQQSSQNQVDSSSIFNEMSNKGKDQGVVVNNVKTGTPAAQIG
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Known secondary structure (DSSP) GGG

TT
B



SSS


B

SSS


SSSSSS


B


TTTS


B



SS
TTGGGT
 .........360.........370.........380.........390......
Sequence LKKGDVIIGANQQAVKNIAELRKVLDSKPSVLALNIQRGDSTIYLL
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Known secondary structure (DSSP)

SS
TT
SSTTT

S


SSS


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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