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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c2zl5A_

Fold library idPDB HeaderMoleculeTitle
c2zl5A_PDB header: viral proteinChain: A: PDB Molecule: 58 kd capsid protein;PDBTitle: atomic resolution structural characterization of2 recognition of histo-blood group antigen by norwalk virus


Added to library: Tue Mar 16 12:42:03 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence FTLPNLPLSSLSNSRAPLPISSMGISPDNVQSVQFQNGRCTLDGRLVGTTPVSLSHVAKIRGTSNGTVIN
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Known secondary structure (DSSP)




S
GGGSB
SSSS
B




TT
S
B

SSS
B
TTS
B
TT

SSGGGTT
SS
 .........80.........90.........100.........110.........120.........130.........140
Sequence LTELDGTPFHPFEGPAPIGFPDLGGCDWHINMTQFGHSSQTQYDVDTTPDTFVPHLGSIQANGIGSGNYV
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Known secondary structure (DSSP)
TTS



GGG
SSSTT




SS
TT




S
STT
BGGGT
TT

S
 .........150.........160.........170.........180.........190.........200.........210
Sequence GVLSWISPPSHPSGSQVDLWKIPNYGSSITEATHLAPSVYPPGFGEVLVFFMSKMPGPGAYNLPCLLPQE
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Known secondary structure (DSSP)

SSSTT



TTS



SSSTTS






B


STT


SSS
SS
 .........220.........230.........240.........250.........260.........270.........280
Sequence YISHLASEQAPTIGEAALLHYVDPDTGRNLGEFKAYPDGFLTCVPNGASSGPQQLPINGVFVFVSWVSRF
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Known secondary structure (DSSP)

S


S
TTT

TTT

BTTTBSGGGS
SS

TT
 .........
Sequence YQLKPVGTV
Predicted secondary structure


SS confidence








Known secondary structure (DSSP)




TT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
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Michael Sternberg  
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