PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c2zkro_

Fold library id	PDB Header	Molecule	Title
c2zkro_	PDB header: ribosomal protein/rna	Chain: O: PDB Molecule: rna expansion segment es30;	PDBTitle: structure of a mammalian ribosomal 60s subunit within an2 80s complex obtained by docking homology models of the rna3 and proteins into an 8.7 a cryo-em map

Links to external resources
Added to library: Tue Mar 16 13:04:07 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence S Q D I Y L R L L V K L Y R F L A R R N S T F N Q V V L K R L F M S R T N R P P L S L S R M I R K M K L P G R E N K T A V V V G T V T D D V

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S
T T T S
S
S S S
S T T S
S S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120

Sequence R I L E V P K L K V C A L R V S S R A R S R I L K A G G K I L T F D Q L A L E S P K G R G T V L L S

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S
S S
T T
S

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

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Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	S	Q	D	I	Y	L	R	L	L	V	K	L	Y	R	F	L	A	R	R	N	S	T	F	N	Q	V	V	L	K	R	L	F	M	S	R	T	N	R	P	P	L	S	L	S	R	M	I	R	K	M	K	L	P	G	R	E	N	K	T	A	V	V	V	G	T	V	T	D	D	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																																	S		T	T	T	S										S		S	S	S			S	T	T	S											S	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120
Sequence	R	I	L	E	V	P	K	L	K	V	C	A	L	R	V	S	S	R	A	R	S	R	I	L	K	A	G	G	K	I	L	T	F	D	Q	L	A	L	E	S	P	K	G	R	G	T	V	L	L	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						S	S																				S	S													T	T			S