PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c2zkrf_

Fold library id	PDB Header	Molecule	Title
c2zkrf_	PDB header: ribosomal protein/rna	Chain: F: PDB Molecule: rna expansion segment es7 part iii;	PDBTitle: structure of a mammalian ribosomal 60s subunit within an2 80s complex obtained by docking homology models of the rna3 and proteins into an 8.7 a cryo-em map

Links to external resources
Added to library: Tue Mar 16 12:20:14 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence P E T K Q E K K Q R L L A R A E K K A A G K G D V P T K R P P V L R A G V N T V T T L V E N K K A Q L V V I A H D V D P I E L V V F L P A L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T S S T T T
S
S S S S
B S T T
S S
S S S T T T T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120

Sequence C R K M G V P Y C I I K G K A R L G H L V H R K T C T T V A F T Q V N S E D K G A L A K L V E A I R

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T
S
T S S
S T T
S S T T T T

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

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Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	P	E	T	K	Q	E	K	K	Q	R	L	L	A	R	A	E	K	K	A	A	G	K	G	D	V	P	T	K	R	P	P	V	L	R	A	G	V	N	T	V	T	T	L	V	E	N	K	K	A	Q	L	V	V	I	A	H	D	V	D	P	I	E	L	V	V	F	L	P	A	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)														T	T	S	S	T	T	T			S			S	S	S	S						B	S										T	T			S						S			S	S	S	T	T	T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120
Sequence	C	R	K	M	G	V	P	Y	C	I	I	K	G	K	A	R	L	G	H	L	V	H	R	K	T	C	T	T	V	A	F	T	Q	V	N	S	E	D	K	G	A	L	A	K	L	V	E	A	I	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					T							S										T	S	S			S					T	T		S	S	T	T	T	T