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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c2zkrc_

Fold library idPDB HeaderMoleculeTitle
c2zkrc_PDB header: ribosomal protein/rnaChain: C: PDB Molecule: rna expansion segment es5;PDBTitle: structure of a mammalian ribosomal 60s subunit within an2 80s complex obtained by docking homology models of the rna3 and proteins into an 8.7 a cryo-em map


Added to library: Tue Mar 16 14:21:27 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence LISVYSEKGESSGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAGHQTSAESWGTGRAVARI
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Known secondary structure (DSSP)


TTSS
SS

GGGGS


TT






S
TTT
S





SSSSS

S
 .........80.........90.........100.........110.........120.........130.........140
Sequence PRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTTQKRYAICSALACLSLPALVMSKGHRIEE
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Known secondary structure (DSSP)

BTTTTB


STT

TTSTT



SS


SSS






T
TT



S
 .........150.........160.........170.........180.........190.........200.........210
Sequence VPELPLVVEDKVEGYKKTKEAVLLLKKLKAWNDIKKVYASQRMRAGKGKMRNRRRIQRRGPCIIYNEDNG
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Known secondary structure (DSSP)
S

S
GGGGG


TT
TTTSS

SSSTTTTT






SSSS
 .........220.........230.........240.........250.......
Sequence IIKAFRKHPGITLLNVSKLNILKLAPGGHVGRFCIWTESAFRKLDDL
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Known secondary structure (DSSP)

TSTT
GGG

SGGG




TT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
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Michael Sternberg  
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