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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c2zbkA_

Fold library idPDB HeaderMoleculeTitle
c2zbkA_PDB header: isomeraseChain: A: PDB Molecule: type ii dna topoisomerase vi subunit a;PDBTitle: crystal structure of an intact type ii dna topoisomerase:2 insights into dna transfer mechanisms


Added to library: Tue Mar 16 13:07:32 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence DKEARRKAANILRDKFLNLVEQLKKGEPLVMEIPMLRRNFLDLNEAKRFMQTVLMASIIYDALVSDEYPT
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Known secondary structure (DSSP)


TT




SS







TTSSTTTTT



 .........80.........90.........100.........110.........120.........130.........140
Sequence IRDLYYRGKHSLLLKSIEENTWDEQKESDSVIVDIEVFTSLLREEMLILSKEKGKVVGNLRIRSGNDVID
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Known secondary structure (DSSP) S

S
S

S





S

SS

T







BSTT
 .........150.........160.........170.........180.........190.........200.........210
Sequence LSKTGHGAYAIEPTPDLIDFIDVDAEFVLVVEKDAVFQQLHRAGFWKQYKSILITSAGQPDRATRRFVRR
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Known secondary structure (DSSP) SS

TT

B


S

SS

S
S
TTTTT


SS

TT
 .........220.........230.........240.........250.........260.........270.........280
Sequence LNEELKLPVYILTDADPYGWYIFSVFRIGSISERLATPDAKFLGVSMGDIFGNSRKKPYLSEAERKNYII
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Known secondary structure (DSSP) S




SSTS
S




S
SS






SSS

SS

 .........290.........300.........310.........320.........330.........340.......
Sequence KAKDADIKRAEEIKNYEWFKTKAWQEEINTFLQRKAKLEIEAMASKGLKFLAFQYIPEKITNKDYIA
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Known secondary structure (DSSP)

TTSTTTTTTTTT


TT
TTT
SB


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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