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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c2z8fB_

Fold library idPDB HeaderMoleculeTitle
c2z8fB_PDB header: sugar binding proteinChain: B: PDB Molecule: galacto-n-biose/lacto-n-biose i transporterPDBTitle: the galacto-n-biose-/lacto-n-biose i-binding protein (gl-2 bp) of the abc transporter from bifidobacterium longum in3 complex with lacto-n-tetraose


Added to library: Tue Mar 16 12:53:37 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence TDDGGVVNITYMHRLPDSEGMTLVNDIVAKWNKQHPDIQVKATKFDGKASDMIKKLETDVKSGEAPDLAQ
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Known secondary structure (DSSP)



S





TTS


TT
SS
GGGT


S
 .........80.........90.........100.........110.........120.........130.........140
Sequence VGYAELPEVFTKGLLQDVTQYAEQYKNDFASGPYSLVQVGGKAYGLPQDTGPLVYFYNKAEFEKLGITEI
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Known secondary structure (DSSP) TTTTT
B


GGGB
TTTT


BTT

S
 .........150.........160.........170.........180.........190.........200.........210
Sequence PQTADEFIAAAKTAAAAGKYIMSYQPDEAGNMISGLAGASGGWYKVKGDSWVVNTETDGSKATADFYQQL
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Known secondary structure (DSSP)

BTT
BS
B

GGGTTTTT

STT



 .........220.........230.........240.........250.........260.........270.........280
Sequence LDAKAATTNPRWDPSFDASIKDGSLIGTVAAAWEAPLFMTSSGGTGSGEWQVAQLGDWFGNAGKTGPDGG
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Known secondary structure (DSSP) TT
SB


TTSTT
B
GGGTTTTTTTT


B
SS
TT
B
B


 .........290.........300.........310.........320.........330.........340.........350
Sequence SAVAVLKNSKHPKEAMEFLDWFNTQVPDLVSQGLVPAATTEDAETPSEWSTFFGGQDIMKEFKTANNNMG
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Known secondary structure (DSSP) BTT
S
T
TT
SB
SS




TTT

TB
 .........360.........370.........380.........390.........
Sequence DFTYMPGFSAVAAKMNETAAKATGKVADIFSDAQTTSVDTLKNFGLSVS
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Known secondary structure (DSSP)




TTT


TTTT

B


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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