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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c2z83A_

Fold library idPDB HeaderMoleculeTitle
c2z83A_PDB header: viral proteinChain: A: PDB Molecule: helicase/nucleoside triphosphatase;PDBTitle: crystal structure of catalytic domain of japanese2 encephalitis virus ns3 helicase/nucleoside triphosphatase3 at a resolution 1.8


Added to library: Tue Mar 16 13:28:18 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence PNMLRKRQMTVLDLHPGSGKTRKILPQIIKDAIQQRLRTAVLAPTRVVAAEMAEALRGLPVRYQTGNEIV
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Known secondary structure (DSSP)
GGGSTT



TTS
TTTTTT


STTTS





S
 .........80.........90.........100.........110.........120.........130.........140
Sequence DVMCHATLTHRLMSPNVPNYNLFVMDEAHFTDPASIAARGYIATKVELGEAAAIFMTATPPGTTDPFPDS
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Known secondary structure (DSSP) S





SSSTT

STTS

SS
TT


SS


 .........150.........160.........170.........180.........190.........200.........210
Sequence NAPIHDLQDEIPDRAWSSGYEWITEYAGKTVWFVASVKMGNEIAMCLQRAGKKVIQLNRKSYDTEYPKCK
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Known secondary structure (DSSP) SS




SS

SS



S

S
TT

STT




GGGSS
 .........220.........230.........240.........250.........260.........270.........280
Sequence NGDWDFVITTDISANFGASRVIDCRKSVKPTILEEGEGRVILGNPSPITSASAAQRRGRVGRNPNQVGDE
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Known secondary structure (DSSP) S


SSS




S
S




SSS

S


TTSS

TT


 .........290.........300.........310.........320.........330.........340.........350
Sequence YHYGGATSEDDSNLAHWTEAKIMLDNIHMPNGLVAQLYGPEREKAFTMDGEYRLRGEEKKNFLELLRTAD
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Known secondary structure (DSSP)
S





TTBTS

TTS





GGGGGG



TTTT


TS
 .........360.........370.........380.........390.........400.........410.........420
Sequence LPVWLAYKVASNGIQYTDRKWCFDGPRTNAILEDNIEVEIVTRMGERKILKPRWLDARVYADHQALKWFK
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Known secondary structure (DSSP)

TT

TT

GGGT
S
GGG

TT

TTS



SSGGGGSS
 ......
Sequence DFAAGK
Predicted secondary structure


SS confidence





Known secondary structure (DSSP) T


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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