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Protein Homology/analogY Recognition Engine V 2.2 |
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Fold library id | PDB Header | Molecule | Title |
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c2z80A_ | PDB header: immune system | Chain: A: PDB Molecule: toll-like receptor 2, variable lymphocyte | PDBTitle: crystal structure of the tlr1-tlr2 heterodimer induced by2 binding of a tri-acylated lipopeptide |
Added to library: Tue Mar 16 13:16:26 2010 | |
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Links to external resources | |
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  | 1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 |
Sequence | S | L | S | C | D | R | N | G | I | C | K | G | S | S | G | S | L | N | S | I | P | S | G | L | T | E | A | V | K | S | L | D | L | S | N | N | R | I | T | Y | I | S | N | S | D | L | Q | R | C | V | N | L | Q | A | L | V | L | T | S | N | G | I | N | T | I | E | E | D | S | F |
Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | |||||||||||||||||||||||||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | ![]() | ![]() | T | T | S | ![]() | ![]() | ![]() | S | T | T | S | S | T | T | T | T | ![]() | ![]() | ![]() | T | T | S | ![]() | ![]() | T | T | T | T | T | T | T | T | ![]() | ![]() | ![]() | T | T | S | ![]() | ![]() | T | T | T | T |   | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 |
Sequence | S | S | L | G | S | L | E | H | L | D | L | S | Y | N | Y | L | S | N | L | S | S | S | W | F | K | P | L | S | S | L | T | F | L | N | L | L | G | N | P | Y | K | T | L | G | E | T | S | L | F | S | H | L | T | K | L | Q | I | L | R | V | G | N | M | D | T | F | T | K | I | Q |
Predicted secondary structure | ![]() | ![]() | ![]() | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | T | T | T | T | ![]() | ![]() | ![]() | S | S | S | S | ![]() | ![]() | ![]() | ![]() | T | T | T | T | S | ![]() | ![]() | ![]() | T | T | S | S | S | S | S | S | T | T | T | T | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | S | S | S | ![]() | ![]() |   | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 |
Sequence | R | K | D | F | A | G | L | T | F | L | E | E | L | E | I | D | A | S | D | L | Q | S | Y | E | P | K | S | L | K | S | I | Q | N | V | S | H | L | I | L | H | M | K | Q | H | I | L | L | L | E | I | F | V | D | V | T | S | S | V | E | C | L | E | L | R | D | T | D | L | D | T |
Predicted secondary structure | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | T | T | T | T | T | T | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | T | T | ![]() | ![]() | T | T | T | T | T | T | S | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | S | S | T | T | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | T | T | T | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | S | B | T | T |   | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 |
Sequence | F | H | F | S | T | N | S | L | I | K | K | F | T | F | R | N | V | K | I | T | D | E | S | L | F | Q | V | M | K | L | L | N | Q | I | S | G | L | L | E | L | E | F | S | R | N | Q | L | K | S | V | P | D | G | I | F | D | R | L | T | S | L | Q | K | I | W | L | H | T | N | P |
Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | |||||||||||||||||||||||||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | ![]() | ![]() | ![]() | ![]() | ![]() | S | B | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | T | T | T | ![]() | ![]() | ![]() | S | S | T | T | T | T | T | T | T | T | ![]() | ![]() | ![]() | S | S |   | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . |
Sequence | W | D | C | S | C | P | R | I | D | Y | L | S | R | W | L | N | K | N | S | Q | K | E | Q | G | S | A | K | C | S | G | S | G | K | P | V | R | S | I | I | C | P | |||||||||||||||||||||||||||||
Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | |||||||||||||||||||||||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | B | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | T | T | T | T | ![]() | ![]() | S | B | B | T | T | T | B | G | G | G |
Download: | PDB structure | FASTA sequence |
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