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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c2z4lC_

Fold library idPDB HeaderMoleculeTitle
c2z4lC_PDB header: ribosomeChain: C: PDB Molecule: 50s ribosomal protein l2;PDBTitle: crystal structure of the bacterial ribosome from escherichia2 coli in complex with paromomycin and ribosome recycling3 factor (rrf). this file contains the 50s subunit of the4 first 70s ribosome, with paromomycin and rrf bound. the5 entire crystal structure contains two 70s ribosomes and is6 described in remark 400.


Added to library: Tue Mar 16 14:25:59 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence AVVKCKPTSPGRRHVVKVVNPELHKGKPFAPLLEKNSKSGGRNNNGRITTRHIGGGHKQAYRIVDFKRNK
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Known secondary structure (DSSP)





TTSTTTSS





TTS

S


GGG






TTB
TTS
B
SSS












SS


 .........80.........90.........100.........110.........120.........130.........140
Sequence DGIPAVVERLEYDPNRSANIALVLYKDGERRYILAPKGLKAGDQIQSGVDAAIKPGNTLPMRNIPVGSTV
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Known secondary structure (DSSP)
S




B


SSSSS

B


BTTS



B

BSS

TT

BSSS

SSTT
B
BTTTS
SS


 .........150.........160.........170.........180.........190.........200.........210
Sequence HNVEMKPGKGGQLARSAGTYVQIVARDGAYVTLRLRSGEMRKVEADCRATLGEVGNAEHMLRVLGKAGAA
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Known secondary structure (DSSP)
SB
SSTTT


BS
STT


TT
TTS

S
SB


S
BS

GGGG



S
 .........220.........230.........240.........250.........260.........270.
Sequence RWRGVRPTVRGTAMNPVDHPHGGGEGRNFGKHPVTPWGVQTKGKKTRSNKRTDKFIVRRRS
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Known secondary structure (DSSP) TTT





GGGS
GGG
TT


SSS


S

B
TTS
BTTS





SSSGGGBSS



Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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