PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c2yvlB_

Fold library id	PDB Header	Molecule	Title
c2yvlB_	PDB header: transferase	Chain: B: PDB Molecule: hypothetical protein;	PDBTitle: crystal structure of trna (m1a58) methyltransferase trmi2 from aquifex aeolicus

Links to external resources
Added to library: Tue Mar 16 13:33:28 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence N S F K E G E Y V L I R F G E K K F L R K L L P K Q S L S V K K S V L K F D E V I G K P E G V K I N G F E V Y R P T L E E I I L L G F E R K

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T
T T
T T
T T G G G T T T
T T T T
S
S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence T Q I I Y P K D S F Y I A L K L N L N K E K R V L E F G T G S G A L L A V L S E V A G E V W T F E A V E E F Y K T A Q K N L K K F N L G K N

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S
T T
T T
T T S S S
S S T T
T T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence V K F F N V D F K D A E V P E G I F H A A F V D V R E P W H Y L E K V H K S L M E G A P V G F L L P T A N Q V I K L L E S I E N Y F G N L E

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S
T T T S
T T
B S
S S
G G G G B
T T
S S T T T

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 . . . . . . .

Sequence V V E I L H R H Y K T I S E R F R P E D Q M V A H T A Y L V F G R K L K T

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
B
G G G
B
S
S

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	N	S	F	K	E	G	E	Y	V	L	I	R	F	G	E	K	K	F	L	R	K	L	L	P	K	Q	S	L	S	V	K	K	S	V	L	K	F	D	E	V	I	G	K	P	E	G	V	K	I	N	G	F	E	V	Y	R	P	T	L	E	E	I	I	L	L	G	F	E	R	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					T	T								T	T									T	T						T	T					G	G	G	T	T	T			T	T				T	T																S			S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	T	Q	I	I	Y	P	K	D	S	F	Y	I	A	L	K	L	N	L	N	K	E	K	R	V	L	E	F	G	T	G	S	G	A	L	L	A	V	L	S	E	V	A	G	E	V	W	T	F	E	A	V	E	E	F	Y	K	T	A	Q	K	N	L	K	K	F	N	L	G	K	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S															T	T			T	T									T	T	S										S	S							S	S														T	T			T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	V	K	F	F	N	V	D	F	K	D	A	E	V	P	E	G	I	F	H	A	A	F	V	D	V	R	E	P	W	H	Y	L	E	K	V	H	K	S	L	M	E	G	A	P	V	G	F	L	L	P	T	A	N	Q	V	I	K	L	L	E	S	I	E	N	Y	F	G	N	L	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						S		T	T	T	S				T	T		B	S						S	S		G	G	G	G								B		T	T								S	S												T	T	T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.
Sequence	V	V	E	I	L	H	R	H	Y	K	T	I	S	E	R	F	R	P	E	D	Q	M	V	A	H	T	A	Y	L	V	F	G	R	K	L	K	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									B				G	G	G			B		S						S