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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c2yvlB_

Fold library idPDB HeaderMoleculeTitle
c2yvlB_PDB header: transferaseChain: B: PDB Molecule: hypothetical protein;PDBTitle: crystal structure of trna (m1a58) methyltransferase trmi2 from aquifex aeolicus


Added to library: Tue Mar 16 13:33:28 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence NSFKEGEYVLIRFGEKKFLRKLLPKQSLSVKKSVLKFDEVIGKPEGVKINGFEVYRPTLEEIILLGFERK
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Known secondary structure (DSSP)



TT
TT

TT
TTGGGTTT

TTTT


S

S
 .........80.........90.........100.........110.........120.........130.........140
Sequence TQIIYPKDSFYIALKLNLNKEKRVLEFGTGSGALLAVLSEVAGEVWTFEAVEEFYKTAQKNLKKFNLGKN
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Known secondary structure (DSSP) S



TT

TT


TTSSS
SSTT

TT
 .........150.........160.........170.........180.........190.........200.........210
Sequence VKFFNVDFKDAEVPEGIFHAAFVDVREPWHYLEKVHKSLMEGAPVGFLLPTANQVIKLLESIENYFGNLE
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Known secondary structure (DSSP)
S
TTTS


TT
BS
SS
GGGGB
TT
SSTTT
 .........220.........230.........240.......
Sequence VVEILHRHYKTISERFRPEDQMVAHTAYLVFGRKLKT
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Known secondary structure (DSSP)





B


GGG

B
S




S




Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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